Gene detail information of Glyur001157s00034145 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74340.1 | 1.00E-28 | dolichol phosphate-mannose biosynthesis regulatory protein-related |
| NR | XP_004509744.1 | 3.37E-48 | PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|C6T426|C6T426_SOYBN | 1.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G04730.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01157 | 57015 | 60080 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001157s00034145.1 | PF07297.7 | DPM2 | 4 | 80 | 5.60E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.148 |
| SRR1783600 | control | 23.512 |
| SRR1783602 | moderate drought stress | 32.237 |
| SRR1811619 | moderate drought stress | 31.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.522 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.729 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 85.845 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 82.910 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.966 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.564 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.673 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 29.155 |
| SRR2868004 | Drought Stress (root) | 30.868 |
| SRR2967015 | Control (root) | 31.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.418 |
| SRR9715740 | Leaf | 17.339 |
| SRR9715741 | Leaf | 18.532 |
| SRR9715739 | Root | 7.465 |
| SRR9715742 | Root | 9.052 |
| SRR9715743 | Root | 7.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.846 |
| SRR8749028 | MeJA induced 9h | 15.669 |
| SRR8749029 | MeJA induced 9h | 18.475 |
| SRR8749030 | Uninduced | 18.513 |
| SRR8749031 | Uninduced | 14.003 |
| SRR8749032 | Uninduced | 13.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.375 |
| SRR8400027 | Control - Root | 30.091 |