Gene detail information of Glyur001154s00030923 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004510123.1 | 4.90E-29 | PREDICTED: uncharacterized protein LOC101506477 [Cicer arietinum] |
| trEMBL | tr|G7JRF2|G7JRF2_MEDTR | 1.00E-28 | Replication factor-A carboxy-terminal domain protein {ECO:0000313|EMBL:AES87872.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01154 | 83211 | 86304 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.579 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.450 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.454 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.476 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.645 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.492 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.227 |
| SRR2868004 | Drought Stress (root) | 0.287 |
| SRR2967015 | Control (root) | 0.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.044 |
| SRR8749028 | MeJA induced 9h | 10.827 |
| SRR8749029 | MeJA induced 9h | 11.067 |
| SRR8749030 | Uninduced | 15.003 |
| SRR8749031 | Uninduced | 16.167 |
| SRR8749032 | Uninduced | 16.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.153 |
| SRR8400027 | Control - Root | 0.018 |