Gene detail information of Glyur001148s00039100


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30220.10inositol transporter 2
NRKHN05290.10Putative inositol transporter 2 [Glycine soja]
COGYP_003405196.18.00E-60sugar transporter [Haloterrigena turkmenica DSM 5511]
Swissprottr|Q9C757|INT2_ARATH0Probable inositol transporter 2
trEMBLtr|V7B0U8|V7B0U8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW10513.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold011482857951531+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0055085  transmembrane transport


cellular_component

GO:0016020  membrane

GO:0016021  integral component of membrane


molecular_function

GO:0005215  transporter activity

GO:0022857  transmembrane transporter activity

GO:0022891  substrate-specific transmembrane transporter activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001148s00039100.1PF00083.19Sugar_tr41501.20E-46
Glyur001148s00039100.1PF00083.19Sugar_tr1543313.20E-42
Glyur001148s00039100.1PF00083.19Sugar_tr4185235.30E-27
Glyur001148s00039100.2PF00083.19Sugar_tr11043.60E-32
Glyur001148s00039100.2PF00083.19Sugar_tr1082852.70E-42
Glyur001148s00039100.2PF00083.19Sugar_tr3724774.60E-27
Glyur001148s00039100.3PF00083.19Sugar_tr11043.60E-32
Glyur001148s00039100.3PF00083.19Sugar_tr1082852.70E-42
Glyur001148s00039100.3PF00083.19Sugar_tr3724774.60E-27
Glyur001148s00039100.4PF00083.19Sugar_tr12494.60E-68
Glyur001148s00039100.4PF00083.19Sugar_tr3364414.00E-27
Glyur001148s00039100.5PF00083.19Sugar_tr41504.50E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.602
SRR1783600control44.813
SRR1783602moderate drought stress24.924
SRR1811619moderate drought stress24.707

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.427
DRR006520Root Summer glycyrrhizin high producing strain11.352
DRR006521Root Winter glycyrrhizin high producing strain7.076
DRR006522Root Winter glycyrrhizin high producing strain6.724
DRR006523Root Summer glycyrrhizin low producing strain17.915
DRR006524Root Summer glycyrrhizin low producing strain17.869
DRR006525Leaf Summer glycyrrhizin high producing strain15.109
DRR006526Leaf Summer glycyrrhizin high producing strain14.689

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)72.715
SRR2868004Drought Stress (root)38.421
SRR2967015Control (root)59.602

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf87.075
SRR9715740Leaf62.694
SRR9715741Leaf151.848
SRR9715739Root34.393
SRR9715742Root45.153
SRR9715743Root40.189

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.871
SRR8749028MeJA induced 9h42.820
SRR8749029MeJA induced 9h7.230
SRR8749030Uninduced39.279
SRR8749031Uninduced3.669
SRR8749032Uninduced9.296

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root86.931
SRR8400027Control - Root47.020

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved