Gene detail

Gene detail information of Glyur001146s00038073.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G44500.1	1.00E-179	O-fucosyltransferase family protein
NR	XP_004506509.1	0	PREDICTED: uncharacterized protein At1g04910-like [Cicer arietinum]
Swissprot	tr\|Q8W486\|Y1491_ARATH	4.00E-42	Uncharacterized protein At1g04910
trEMBL	tr\|V7AJY4\|V7AJY4_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW05844.1}

Sequence

Transcript Sequence

>Glyur001146s00038073.1
CTGACTTTGTGTTCCCGCCGCCCCTTCTCTCTCTACCACCATTCTCTCTANTCTCTCTCTCTAATAGTAAAAAGCCATTAACACAACCACAGCTTTAACAAGAAGGGTTTTTTGGTTGGAAAGGAAAGAAAGCCTCTTTCTTATAAAAACCACCCCACCAAAAACAAACCCATCAACATAGAAGAAGAAAGAAGCAAGATCAGTAGTAGNAAGAATAATGGCCAAGTCCAAGAACAATGCAAAGAAGCTATCATACATCTCAGTCCCTTCCCAGATCATCAATTCCATATCATCTTCTTCTCTTCAATCACTCCTTGAATCCCCCAAGAAGTCTTCCGCAAGAACCTCCAAGCTCTCCTTCACCATCTTCACCAACAAGTGGAGGATCCCAAGACCCTTCTTCTTCTTCTTCTTCACTCTCTTTCTCCTTGGTGTCTTTGCCATGCTCAAGTTTGGCTTCAATCTAGAAACCCCATTTTCTCCCTACCCATGTGCCACAACCACCACCCTCCCACATTCAAAACCCCAACTTGGGGTTGCCTCATCACAAAAAGATGAGATATTGAATGATACTACTATGTCATACTCACTGCCCCTTATTGCCAATGTGCAGTTACAAGCAAAAGGGCCTAGTGGGGTGGAGAAGGAGGATGAGGGAAATGATGGGGAAGTTGGAAAGATTGAGTTTTGGAAGCAACCAAATGGGTTGGGGTATAAGCCTTGCTTGGGTTTTAGCAGGGATTATAGGAGGGCAAGTGAAGGGGTTTTGAGGAATAGGAGGAAGTATCTCATGGTGGTGGTTTCTGGAGGGATGAATCAGCAGAGGAATCAGATTGTTGATGCTGTTGTCATTGCTAGGATTCTTGGGGCTGCTTTGGTTGTCCCTATATTGCAAGTCAATGTCATTTGGGGAGATGAAAGTGTTCTTGCCAATGATGTGAGAGTGGTTTCAGCATTGCCATCAACACACCTGATGACAAGGCCAGTGGAGGGAAGCCCTCCCCTTCATGTCACTCCCAGTTGGATCCGTTCAAGATATCTCAGAAGACTCAACAGAGAAGGTGTCTTGCTTTTACGCGGCTTGGATTCAAGGTTGTCAAAGGATCTTCCTTCTGATCTTCAGAAGCTTCGATGCAAGGTTGCTTTTAGTGCATTAAGGTTTGCAAAGCCAGTTCTGGAACTTGGTAACAAGATTGCAGAGAGGATGCAAAGCAAGGGACCCTACCTTGCGCTTCATCTACGAATGGAAAAGGACGTGTGGGTGAGGACTGGTTGTCTACCTGGTCTGAGTCCTGAGTATGATGAGGTTGTAAAGAATGAGAGGGTACAAAGGCCAGAGCTCTTGACAGCAAGATCAAACATGACTTACCATGAAAGGAAGATGGCTGGCCTTTGCCCCTTGAATGCTATGGAGGCCTTGGGTCCATTGATCCATGAGTTTCCACATCTTTACAATAAGGAAGATCTTGCCTTGCCTGGAGAACTAGAACCATTTGCAAAGAAAGCTTCTCTAATGGCTGCCATAGATTACATAGTCTCTGAGAAGAGTGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCAATTCAGGGTCACAGGGCCTATGCAGGGCACAAGAAATACATAACCCCAAACAAGAGACAGATGCTCCCCTATTTTCTGGATCCTTCCGTCCCTGAAGAAGAGTTCAACAGGATCATCAAGGAATTGCACCAGAATTCATTGGGGCAGCCAGAACTGAGGACTAGCAAGGCTGGGAGGGATGTCACCAAGTATCCTGTCCCTGGGTGCATGTGCAATGACTCACATGATTATCATTCCTAATCGAAAGTTCGATTACCGAAGCTTTCTGGTATGAAGATTACATGGAAATATGGATACTCAAATGTGGAACCACAGGGCAACCACAGTTCTGATGAGCACCATTTTTTTTGAAGAGCTATANTGTCAAGCATGCCTCTCCCCGCAGGTGTATTCGCATTATTCTTTAAACACGCTTAATGTGTACATGATTTAGGTTTCCATGATACATAAAAATGATTCACAATAGATCATTNTTTGATTCTTTATATAGTTTGTATAGGATACATGTTACTTTTGTTATCTGTAATTCTTTGCAGTGCATTACAAAGCATTGTACATATATCTGAACAAATAATCAGTTTTATATTTTGTTTACTTGATCTTCAAGATCACCTCTTGCTTCCACATAATTAAGCAGTAGGAGTTTTACACAAGTTGCAGATAACCCCCTTTGGAATAATTTTCTTTTTTTTCAAAGGGGGTTTCATAAAACGGGCAAAGCCCAAAGGGCACTACATCAAGTGTCTCTAAACATACACATAAACATTGCATAGACACACACCTGACAAAATGAGACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01146	8589	12201	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001146s00038073.1	PF10250.4	O-FucT	194	235	3.70E-10
Glyur001146s00038073.1	PF10250.4	O-FucT	259	399	1.60E-19
Glyur001146s00038073.1	PF10250.4	O-FucT	400	469	2.30E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.906
SRR1783600	control	3.036
SRR1783602	moderate drought stress	3.310
SRR1811619	moderate drought stress	3.245

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.441
DRR006520	Root Summer glycyrrhizin high producing strain	16.996
DRR006521	Root Winter glycyrrhizin high producing strain	5.305
DRR006522	Root Winter glycyrrhizin high producing strain	4.982
DRR006523	Root Summer glycyrrhizin low producing strain	45.942
DRR006524	Root Summer glycyrrhizin low producing strain	45.730
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.836
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.782

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.293
SRR2868004	Drought Stress (root)	27.378
SRR2967015	Control (root)	21.325

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	23.520
SRR9715740	Leaf	11.525
SRR9715741	Leaf	31.675
SRR9715739	Root	27.377
SRR9715742	Root	64.380
SRR9715743	Root	54.250

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	311.876
SRR8749028	MeJA induced 9h	605.780
SRR8749029	MeJA induced 9h	505.124
SRR8749030	Uninduced	648.490
SRR8749031	Uninduced	419.452
SRR8749032	Uninduced	440.242

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.126
SRR8400027	Control - Root	21.959