Gene detail information of Glyur001145s00032027 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11300.1 | 6.00E-93 | protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding |
| NR | KHN11004.1 | 0 | G-type lectin S-receptor-like serine/threonine-protein kinase [Glycine soja] |
| Swissprot | tr|Q9SXB8|Y1133_ARATH | 1.00E-113 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 (Precursor) |
| trEMBL | tr|I1KZ77|I1KZ77_SOYBN | 0 | Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01145 | 64188 | 69728 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001145s00032027.1 | PF01453.19 | B_lectin | 103 | 213 | 3.90E-31 |
| Glyur001145s00032027.1 | PF00954.15 | S_locus_glycop | 240 | 349 | 2.60E-23 |
| Glyur001145s00032027.1 | PF08276.6 | PAN_2 | 383 | 440 | 1.30E-15 |
| Glyur001145s00032027.1 | PF01453.19 | B_lectin | 587 | 697 | 2.00E-29 |
| Glyur001145s00032027.1 | PF00954.15 | S_locus_glycop | 725 | 834 | 9.50E-25 |
| Glyur001145s00032027.1 | PF08276.6 | PAN_2 | 868 | 925 | 3.50E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.485 |
| SRR1783600 | control | 0.519 |
| SRR1783602 | moderate drought stress | 0.655 |
| SRR1811619 | moderate drought stress | 0.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.834 |
| SRR2868004 | Drought Stress (root) | 19.884 |
| SRR2967015 | Control (root) | 14.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.045 |
| SRR9715740 | Leaf | 0.022 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.017 |
| SRR9715742 | Root | 0.145 |
| SRR9715743 | Root | 0.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.419 |
| SRR8749028 | MeJA induced 9h | 1.255 |
| SRR8749029 | MeJA induced 9h | 0.348 |
| SRR8749030 | Uninduced | 1.168 |
| SRR8749031 | Uninduced | 3.084 |
| SRR8749032 | Uninduced | 0.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.135 |
| SRR8400027 | Control - Root | 3.509 |