Gene detail information of Glyur001145s00032021 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004508548.1 | 1.10E-09 | PREDICTED: GDP-mannose transporter GONST4-like [Cicer arietinum] |
| Swissprot | tr|Q84L08|GONS4_ARATH | 3.00E-10 | GDP-mannose transporter GONST4 |
| trEMBL | tr|A0A072V1V0|A0A072V1V0_MEDTR | 4.00E-10 | Nucleotide-sugar transporter {ECO:0000313|EMBL:KEH32100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01145 | 29324 | 31703 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.328 |
| SRR1783600 | control | 1.321 |
| SRR1783602 | moderate drought stress | 3.224 |
| SRR1811619 | moderate drought stress | 2.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.326 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.081 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.618 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.518 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.363 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.675 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.128 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.087 |
| SRR2868004 | Drought Stress (root) | 5.054 |
| SRR2967015 | Control (root) | 3.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.894 |
| SRR9715740 | Leaf | 1.848 |
| SRR9715741 | Leaf | 1.391 |
| SRR9715739 | Root | 0.738 |
| SRR9715742 | Root | 1.567 |
| SRR9715743 | Root | 0.783 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.655 |
| SRR8749028 | MeJA induced 9h | 0.438 |
| SRR8749029 | MeJA induced 9h | 1.563 |
| SRR8749030 | Uninduced | 0.795 |
| SRR8749031 | Uninduced | 1.100 |
| SRR8749032 | Uninduced | 0.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.487 |
| SRR8400027 | Control - Root | 3.487 |