Gene detail information of Glyur001141s00037773 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71310.2 | 4.00E-60 | cobalt ion binding |
| NR | AFK47661.1 | 1.53E-99 | unknown [Lotus japonicus] |
| COG | YP_007061713.1 | 2.00E-22 | hypothetical protein Syn6312_2038 [Synechococcus sp. PCC 6312] |
| trEMBL | tr|I3T569|I3T569_LOTJA | 6.00E-100 | Uncharacterized protein {ECO:0000313|EMBL:AFK47661.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01141 | 53830 | 56944 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.648 |
| SRR1783600 | control | 5.781 |
| SRR1783602 | moderate drought stress | 6.009 |
| SRR1811619 | moderate drought stress | 5.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.413 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.528 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.132 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.468 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.173 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.941 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.273 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.381 |
| SRR2868004 | Drought Stress (root) | 14.953 |
| SRR2967015 | Control (root) | 12.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.730 |
| SRR9715740 | Leaf | 9.432 |
| SRR9715741 | Leaf | 7.630 |
| SRR9715739 | Root | 8.231 |
| SRR9715742 | Root | 6.601 |
| SRR9715743 | Root | 5.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.168 |
| SRR8749028 | MeJA induced 9h | 29.553 |
| SRR8749029 | MeJA induced 9h | 38.997 |
| SRR8749030 | Uninduced | 16.150 |
| SRR8749031 | Uninduced | 10.422 |
| SRR8749032 | Uninduced | 9.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.624 |
| SRR8400027 | Control - Root | 17.341 |