Gene detail information of Glyur001138s00028226 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ABN05933.1 | 7.74E-45 | hypothetical protein MtrDRAFT_AC149129g23v2 [Medicago truncatula] |
| trEMBL | tr|A2Q1W6|A2Q1W6_MEDTR | 3.00E-45 | Putative uncharacterized protein {ECO:0000313|EMBL:ABN05933.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01138 | 66855 | 72961 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.103 |
| SRR1783600 | control | 0.134 |
| SRR1783602 | moderate drought stress | 0.073 |
| SRR1811619 | moderate drought stress | 0.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.054 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.048 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.602 |
| SRR2868004 | Drought Stress (root) | 7.710 |
| SRR2967015 | Control (root) | 2.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.219 |
| SRR8749028 | MeJA induced 9h | 17.087 |
| SRR8749029 | MeJA induced 9h | 9.900 |
| SRR8749030 | Uninduced | 24.024 |
| SRR8749031 | Uninduced | 33.415 |
| SRR8749032 | Uninduced | 6.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.003 |
| SRR8400027 | Control - Root | 0.000 |