Gene detail information of Glyur001137s00022788 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53560.1 | 1.00E-14 | Ribosomal protein L18ae family |
| NR | AFK49106.1 | 1.37E-43 | unknown [Lotus japonicus] |
| Swissprot | tr|Q8L9S1|R18AL_ARATH | 5.00E-29 | 60S ribosomal protein L18a-like protein |
| trEMBL | tr|I3T9B4|I3T9B4_LOTJA | 5.00E-44 | Uncharacterized protein {ECO:0000313|EMBL:AFK49106.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01137 | 86326 | 88092 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.315 |
| SRR1783600 | control | 0.216 |
| SRR1783602 | moderate drought stress | 1.575 |
| SRR1811619 | moderate drought stress | 2.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.491 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.673 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.315 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.319 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.025 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.394 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.100 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.874 |
| SRR2868004 | Drought Stress (root) | 8.145 |
| SRR2967015 | Control (root) | 7.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.950 |
| SRR9715740 | Leaf | 1.177 |
| SRR9715741 | Leaf | 1.396 |
| SRR9715739 | Root | 1.607 |
| SRR9715742 | Root | 1.924 |
| SRR9715743 | Root | 1.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.280 |
| SRR8749028 | MeJA induced 9h | 0.561 |
| SRR8749029 | MeJA induced 9h | 1.425 |
| SRR8749030 | Uninduced | 1.108 |
| SRR8749031 | Uninduced | 0.835 |
| SRR8749032 | Uninduced | 0.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.243 |
| SRR8400027 | Control - Root | 1.843 |