Gene detail information of Glyur001137s00022771 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18600.1 | 6.00E-42 | Thioredoxin superfamily protein |
| NR | XP_003593970.1 | 6.51E-64 | Monothiol glutaredoxin-S2 [Medicago truncatula] |
| COG | YP_003952551.1 | 3.00E-09 | glutaredoxin [Stigmatella aurantiaca DW4/3-1] |
| Swissprot | tr|Q8L8Z8|GRXS2_ARATH | 3.00E-53 | Monothiol glutaredoxin-S2 |
| trEMBL | tr|G7IQ03|G7IQ03_MEDTR | 2.00E-64 | Monothiol glutaredoxin-S2 protein {ECO:0000313|EMBL:AES64221.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01137 | 9030 | 9338 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001137s00022771.1 | PF00462.19 | Glutaredoxin | 13 | 75 | 7.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.775 |
| SRR1783600 | control | 2.449 |
| SRR1783602 | moderate drought stress | 2.830 |
| SRR1811619 | moderate drought stress | 4.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.285 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.047 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 39.231 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.874 |
| SRR9715740 | Leaf | 33.888 |
| SRR9715741 | Leaf | 11.569 |
| SRR9715739 | Root | 1.098 |
| SRR9715742 | Root | 3.617 |
| SRR9715743 | Root | 3.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.015 |