Gene detail

Gene detail information of Glyur001136s00034204

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G60030.1	4.00E-157	nucleobase-ascorbate transporter 7
NR	KHN10623.1	0	Nucleobase-ascorbate transporter 6 [Glycine soja]
COG	YP_007285782.1	3.00E-37	xanthine/uracil permease [Halovivax ruber XH-70]
Swissprot	tr\|Q0WPE9\|NAT7_ARATH	0	Nucleobase-ascorbate transporter 7
trEMBL	tr\|K7L9L6\|K7L9L6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G40100.3}

Sequence

Transcript Sequence

>Glyur001136s00034204.1
ATGGCAGGAAGGGCAGCACCACAACCAAAACAGGATGAGCTTCAGCCACATCCAGTCAAAGATCAATTACCAAATGTTTCTTATTGCATTACAAGTCCTCCTCCATGGCCTGAGGCAATCTTACTTGGTTTTCAACATTACCTGGTGATGCTTGGCACAACTGTTCTAATACCAAGCTCTCTAGTTCCCCAAATGGGAGGAGGAAATGAAGAGAAAGCAAAAGTGATTCAGACTCTACTGTTTGTGGCTGGCATAAACACATTCTTCCAAACAANATTTGGGACTCGTCTACCTGCAGTTATTGGGGGATCCTACACTTTTGTGCCAACAACAATTTCAATAATTTTGGCAGGTCGCTACAGTGACATTGTGAATCCTCAGGAGAAATTTGAGAGGATAATGCGTGGAACACAAGGTGCCCTTATTGTTGCTTCAACCCTCCAAATTGTTGTTGGCTTCAGTGGCCTTTGGCGCAATGTAGTGAGGTTCTTAAGTCCTCTATCTGCTGTTCCCTTGGTTGCTCTGTCAGGCTTTGGGCTGTATGAACTGGGTTTTCCTGTGCTTGCAAAATGTGTGGAAATTGGGCTGCCAGAAATCATCATCCTACTAGTATTTTCACAGTACATTCCACACATGATGAAAGGAGACAAGCCTATCTTTGATCGATTTGCAGTTATATTCTCAGTGGCAATTGTGTGGATTTATGCTCATCTTCTTACTGTTGGTGGAGCTTATAAAAATTCATCACCTAAAACCCAAATTACATGCAGGACTGATCGTGCTGGAATCATANGTGGTGCTCCTTGGATAAGAATCCCATATCCCTTTCAATGGGGAGCTCCTACATTTGATGCTGGTGAAGCTTTTGCTATGATGGCTGCTACATTTGTTGCTCTAGTAGAGTCAACTGGTGCTTTCATTGCTGTGTCAAGGTATGCAAGTGCAACACCAATTCCACCTTCAGTTCTTAGCCGAGGTGTCGGCTCTGCAGGTCTCAGTTTCCTTCAGTTTTGCAATTTAAACAGCTTTAGAACTAAATTCATCCTAGGCTTCTCTGTTTTCATGGGTTTCTCTATACCACAATACTTCAATGAGTACACAGCATTTAAAGGCTATGGTCCTGTACACACCCGCGCCAGATGGGTACCCATCTTCCTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01136	34516	39772	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0016020 membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001136s00034204.1	PF00860.15	Xan_ur_permease	38	333	3.50E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.150
SRR1783600	control	0.867
SRR1783602	moderate drought stress	0.599
SRR1811619	moderate drought stress	0.527

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.426
DRR006520	Root Summer glycyrrhizin high producing strain	2.474
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	2.825
DRR006524	Root Summer glycyrrhizin low producing strain	2.928
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.530
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.635

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.530
SRR2868004	Drought Stress (root)	6.957
SRR2967015	Control (root)	8.281

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.586
SRR9715740	Leaf	0.163
SRR9715741	Leaf	0.310
SRR9715739	Root	0.382
SRR9715742	Root	1.420
SRR9715743	Root	0.919

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.016

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.508
SRR8400027	Control - Root	3.658