Gene detail information of Glyur001136s00034201 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10522.2 | 5.00E-23 | |
| NR | XP_004509865.1 | 6.31E-81 | PREDICTED: uncharacterized protein LOC101502402 [Cicer arietinum] |
| trEMBL | tr|G7LFF8|G7LFF8_MEDTR | 1.00E-73 | Uncharacterized protein {ECO:0000313|EMBL:AET03137.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01136 | 4541 | 8215 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.243 |
| SRR1783600 | control | 5.366 |
| SRR1783602 | moderate drought stress | 3.131 |
| SRR1811619 | moderate drought stress | 3.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.187 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.146 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.544 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.759 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.620 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.706 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.116 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.934 |
| SRR2868004 | Drought Stress (root) | 1.443 |
| SRR2967015 | Control (root) | 2.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.571 |
| SRR9715740 | Leaf | 5.385 |
| SRR9715741 | Leaf | 3.328 |
| SRR9715739 | Root | 1.049 |
| SRR9715742 | Root | 0.973 |
| SRR9715743 | Root | 1.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.465 |
| SRR8749028 | MeJA induced 9h | 1.042 |
| SRR8749029 | MeJA induced 9h | 0.970 |
| SRR8749030 | Uninduced | 0.359 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.513 |
| SRR8400027 | Control - Root | 2.982 |