Gene detail information of Glyur001133s00027784 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55800.1 | 6.00E-147 | sedoheptulose-bisphosphatase |
| NR | ACU23254.1 | 0 | unknown [Glycine max] |
| COG | YP_901446.1 | 4.00E-49 | fructose-1,6-bisphosphatase [Pelobacter propionicus DSM 2379] |
| Swissprot | tr|P46283|S17P_ARATH | 0 | Sedoheptulose-1,7-bisphosphatase, chloroplastic (Precursor) |
| trEMBL | tr|C6TK14|C6TK14_SOYBN | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23254.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01133 | 63650 | 67315 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01100 | E3.1.3.37 | EC:3.1.3.37 | Carbon metabolism | map01200 |
| Carbon fixation in photosynthetic organisms | map00710 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001133s00027784.1 | PF00316.15 | FBPase | 72 | 335 | 2.70E-85 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.142 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.186 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.190 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.255 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 598.992 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 596.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.158 |
| SRR2868004 | Drought Stress (root) | 8.012 |
| SRR2967015 | Control (root) | 0.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 597.601 |
| SRR9715740 | Leaf | 689.452 |
| SRR9715741 | Leaf | 494.818 |
| SRR9715739 | Root | 0.026 |
| SRR9715742 | Root | 0.572 |
| SRR9715743 | Root | 0.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.041 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.845 |
| SRR8400027 | Control - Root | 1.234 |