Gene detail information of Glyur001132s00025480 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31980.1 | 3.00E-20 | PHYTOCYSTATIN 2 |
| NR | XP_004502264.1 | 6.09E-50 | PREDICTED: cysteine proteinase inhibitor 2-like [Cicer arietinum] |
| Swissprot | tr|Q8L5T9|CYT2_ARATH | 1.00E-29 | Cysteine proteinase inhibitor 2 (Precursor) |
| trEMBL | tr|I1MYC1|I1MYC1_SOYBN | 1.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G00690.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01132 | 73681 | 74094 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001132s00025480.1 | PF00031.16 | Cystatin | 40 | 105 | 4.50E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.800 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.849 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.029 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.792 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.951 |
| SRR8749028 | MeJA induced 9h | 20.124 |
| SRR8749029 | MeJA induced 9h | 33.650 |
| SRR8749030 | Uninduced | 6.083 |
| SRR8749031 | Uninduced | 1.702 |
| SRR8749032 | Uninduced | 20.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.104 |