Gene detail

Gene detail information of Glyur001132s00025479

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G23670.1	phragmoplast-associated kinesin-related protein, putative
NR	XP_004502267.1	PREDICTED: kinesin-like protein KIN12B-like [Cicer arietinum]
Swissprot	tr\|Q8L7Y8\|KN12B_ARATH	Kinesin-like protein KIN12B
trEMBL	tr\|V7D3G6\|V7D3G6_PHAVU	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur001132s00025479.1
ATGAAGCACTTCATGCTTCCAACAAGGAACGCAGAGCTCCCATGTTCGTCAAGCCCAAGCTCCACCAAATCCAGACCCTCACGCAAGCACAAATCNTCCTCCAAGGAGAACGATCCTCCCTCAGATCCCAACATCATCGTCCCCTCTTCCCCTTCCCACACCAAATTGAAGAGCCCCTTACCACCGAGGCCTCCCTCTTCCAACCCTCTCAAGCGCAAGCTCACCAATGACACCACACTCTTCGACAATTCCCTCCCTGGAACCTCCGATTCCGGCGTTAAGGTTATTGTGAGGATGAGGCCACTGTGCCAGGAGAAGGACGAAGGGGATCCTATAGTTCAGAAGATCTCCGGGGATTCGTTATCGATTAACGGCCAGACTTTCACCTTCGATTCCGTTGCTGACATGGAGGCTACTCAGCTTGATATTTTCGANCATGTCGGGGTGCCTCTGGTTGAGAATTGCTTGGCAGGCTTCAATAGTTCAGTGTTTGCTTATGGACAGACTGGGAGTGGGAAGACTTATACAATGTGGGGTCCTGCCAATTCTCTGTCGGAGGAAAATGCAACTAAAGATCAGCAAGGCCTTACACCCCGTGTTTTTGAGCGACTCTTTGAACGCATGAATGAAGAGGAAGCTAAGCATTCTGATGAACAGCTCAAGTATCAGTGCCACTGCTCTTTTCTTGAGATATACAATGAGCAAATCACGGATCTGTTGGATCCCAATCAAAGAAACCTACAGATTAGAGAAGATGTCAAATCTGGTGTCTATGTTGAAAATCTTACAGAAGAGCCTGTGTCTACGATGAAGGATGTAACTCAGCTTTTAATGAAGGGATTATCAAACAGGAGAATAGGTGCAACCAGTATAAATTCTGAGAGTTCCCGCTCACATACTGTTTTTACTTGTGTTGTCGAATCTCGATGCAAGAGCCCAGCAGATGGTATAAGCAGATTTAAAACAAGTAGAATCAATCTTGTTGATTTGGCTGGGTCAGAACGACAAAAATTAACGGGTGCTGCAGGAGAGCGTCTGAAGGAAGCTGGCAATATTAATAGATCACTCTCACAGCTTGGGAATTTGATAAATATCCTCGCGGAAGTCTCTCAAACAGGAAAGCAGCGGCATATACCATATAGAGATTCCAGGTTGACATTTTTGTTGCAGGAGTCTCTTGGAGGAAACGCAAAATTGGCAATGGTTTGTGCTATTTCCCCGGCACAAAGTTGTAGGAGTGAAACTTTCAGTACTTTGAGATTTGCACAACGTGCCAAAGCCATCAAGAACAAGGCAGTTGTTAATGAAGTTATGCAGGATGATGTGAACCAATTGCGACAAGTGATACGGCAACTAAGGGATGAACTGCATCGAATTAAAGCAAATGGTTACAATCCAATGGACTCAAGTGGAGGTCATTCAGCAGCTTGGGTTCGAAGAAGCTTGAATTTATTACAGTCTAGCCTTAATAGACAACCACCATTATCCCGTGTTGATGAAGATGGTGATGAGGAGATGGAGATTGATGAGGAAGGTGTTGAAGACCATNATGAAGTTTTATGCAATGCCAATATGCTGAATAATTCTAATATTGTATCNGAAAATGACAGCGAAATGAACACTGATGATCAAGATTTGGCTCAACCCAGNGAGGAGAAAAATACTNATAGTTTATCTGGCAGTAAATGTCNGAATGAAGAATCNTCCTGTGCCATTGCACGAAGCAGTCTCTCTTGTCATGTGGGTGAATCTGACATTGGAGATTTCGCTGGTTTTTCAGCCCCAAATGCATCCACTGATTCTCCNAGTGCCACAATGAATTGTGTCTCACCTACTGGCCTTAACATAGTTAAAGATGATTTATCCCCAGTCCTGAAATCCCCAACTCCTAGTGTTTCTCCTAGAGTCAGCACCAGCAGGAAAAGTCTGAGGACATCATCAGGGCTGTCTCCTTCTGAGAACAATCTTCATGTTGAAAGTGATTTGGGCATCAAAGCTGGCAATCTGAAAAGCTCATNTAATGCCTTTTCTAGTCAGACNGCTCCAAATTTCCTTACTAAAACAGAAAATTTAGCAGCAAGCATTCGCCATGGTCTTGAAATTATTGATAGTCACAATCGTAATGCAGCTTCGAGGCAGTCAGCTTTGAGGCAGTCAGCTTTGAGGTTTTCATTGCGACCAAGAGAATCCAGACTAATTTTTCCAGCTGACAAAGTTGATGTGGGCGTGCAGACTTTTCTTGATGACAATGTTGAAGAAGATTCTGTTTTGTTCACCTGTAGTAATTGTAAAAACAGAGCACAACTTGATGTCAATGAGATTGACAATAACTCNAACCTACAGTTGGTACCTGTTGATTGCCCTGAGTCTGTTGATAAGCCGAAGAAGCAGGTTCTCAAAGCAATAGAGAAGGTTTTGGCAGGATCGATAAGGAGAGAAATGGCACTNGAAGATTTCTGTGCAAAGCAGACTTCTGAGATAATGCAGCTTAATCGCTTGGTCCAACAATACAAGCATGAAAGGGAATGCAATGCCATAATTGCACAGACAAGGGAAGATAAAATTCTTCGCCTTGAGAGCCTTATGGATGGTGTTTTACCCACCGAGGAGTTCATGAATGAAGAGCTGGTGGCCCTTACCCATGAACACAAGCTTTTAAAGGAGAAGTACGAGAATCATCCAGAAGTTTTGAAGATGGAAATAGAGTTGAAAAGAGTACGAGATGAACTAGAAGAGTATCAAAATTTCTACAAATTGGGGGAGAGGGAAGTACTGATGGAAGAGATACAAAATTTAAGAAGCCAGCTTCAATTTTATGTTGATTCTTCATCCACAGCAGCAAGGAAGCAATATCCGCTATTGCAATTGACTTATTCATCTGAACCCAGTTTGGCAGCAACAACTCTNACAGCCATCCCAGAGTCAGTAGAGGAGAGGGATGAAACCAGTGAAATTCCAGCATCAACCAAGGACAGTGCTGAGGTAAAACTTGAACAAGAAAGAATTAGATGGACTGAGGCAGAAAGCAGGTGGATTTCTCTTTCTGAAGAACTGAGGGCCGAGCTTGAAGCTAACAGGTCGCTAGCTGAAAAGAGGAAGCGAGAATTAGATGCTGAGAGGAACTGTACTAAGGAACTTGAGGAAGCCATGCACATAGCTATAGAGGGCCATGCCCGAATTTTAGAACAGTATGCAGATTTGGAAGAGAAACANATCCAATTGCTTGCAAGGCATAGAAAGATCCAGGATGGAATTGAGGATGTCAAGAAAGCAGCTTCCAGAGCAGGAGTAAGAGGTNCAGAGTCTAAGTTCATAAATGNCCTTGCTGCAGAAATTTCAGCANTAAAAGCAGATAGAGAAAAAGAAAGGCGAATCTTAAGGGATGAAAATAGAGGGCTTCAGGCCCAATTGAAGGATACTGCGGAAGCAGTTCAAGCTGCTGGTGAACTGCTTTTCCGGCTTAAAGAAGCTGAAGAAGCTGTCACTACTGCACAGAAACGGGCTATGGATGCAGAGCAGGAAGCTGCAAAGGCCTACAAACAAATTGANAAGTTGAAGAAGAAATACGAGAAGGAGATTAAAGCACTCAATGAGCTCCTTGCAGAAGCACGTTTGCCGAAGGAATCGGCACGGCCGATTTATGATGATGTTGCCATGCCCAATTATGATGATGACTTAAAGGAGCCACACAGTGTTAATGATCAGTTTGAGCCCTTTATTANTAATGCAGAGGACGGTGAGCTTGCAAAANTAGCAGAACCATCATGGTTTTCTGGATACGACAGATGCAATATATAAAATCATCATACTTTGTGTGTCATTTTGTATCAATTTGTTCATATGATTTGAGGAAATGATTGTATTCTTTCGTTCTTACTCTTTGTGAGCATAAATGAGTTTGTCTCCCATCCGTCTTTCTTCCTGCAAAGCTTAATCTGA

Protein Sequence

>Glyur001132s00025479.1
MKHFMLPTRNAELPCSSSPSSTKSRPSRKHKSSSKENDPPSDPNIIVPSSPSHTKLKSPLPPRPPSSNPLKRKLTNDTTLFDNSLPGTSDSGVKVIVRMRPLCQEKDEGDPIVQKISGDSLSINGQTFTFDSVADMEATQLDIFXHVGVPLVENCLAGFNSSVFAYGQTGSGKTYTMWGPANSLSEENATKDQQGLTPRVFERLFERMNEEEAKHSDEQLKYQCHCSFLEIYNEQITDLLDPNQRNLQIREDVKSGVYVENLTEEPVSTMKDVTQLLMKGLSNRRIGATSINSESSRSHTVFTCVVESRCKSPADGISRFKTSRINLVDLAGSERQKLTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAISPAQSCRSETFSTLRFAQRAKAIKNKAVVNEVMQDDVNQLRQVIRQLRDELHRIKANGYNPMDSSGGHSAAWVRRSLNLLQSSLNRQPPLSRVDEDGDEEMEIDEEGVEDHXEVLCNANMLNNSNIVSENDSEMNTDDQDLAQPXEEKNTXSLSGSKCXNEESSCAIARSSLSCHVGESDIGDFAGFSAPNASTDSPSATMNCVSPTGLNIVKDDLSPVLKSPTPSVSPRVSTSRKSLRTSSGLSPSENNLHVESDLGIKAGNLKSSXNAFSSQTAPNFLTKTENLAASIRHGLEIIDSHNRNAASRQSALRQSALRFSLRPRESRLIFPADKVDVGVQTFLDDNVEEDSVLFTCSNCKNRAQLDVNEIDNNSNLQLVPVDCPESVDKPKKQVLKAIEKVLAGSIRREMALEDFCAKQTSEIMQLNRLVQQYKHERECNAIIAQTREDKILRLESLMDGVLPTEEFMNEELVALTHEHKLLKEKYENHPEVLKMEIELKRVRDELEEYQNFYKLGEREVLMEEIQNLRSQLQFYVDSSSTAARKQYPLLQLTYSSEPSLAATTLTAIPESVEERDETSEIPASTKDSAEVKLEQERIRWTEAESRWISLSEELRAELEANRSLAEKRKRELDAERNCTKELEEAMHIAIEGHARILEQYADLEEKXIQLLARHRKIQDGIEDVKKAASRAGVRGXESKFINXLAAEISAXKADREKERRILRDENRGLQAQLKDTAEAVQAAGELLFRLKEAEEAVTTAQKRAMDAEQEAAKAYKQIXKLKKKYEKEIKALNELLAEARLPKESARPIYDDVAMPNYDDDLKEPHSVNDQFEPFIXNAEDGELAKXAEPSWFSGYDRCNI

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01132	65056	71910	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001132s00025479.1	PF00225.18	Kinesin	115	428	2.50E-108
Glyur001132s00025479.1	PF06548.6	Kinesin-related	687	1206	4.50E-182

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.460
SRR1783600	control	3.407
SRR1783602	moderate drought stress	1.884
SRR1811619	moderate drought stress	1.935

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.257
DRR006520	Root Summer glycyrrhizin high producing strain	5.207
DRR006521	Root Winter glycyrrhizin high producing strain	1.070
DRR006522	Root Winter glycyrrhizin high producing strain	1.151
DRR006523	Root Summer glycyrrhizin low producing strain	2.067
DRR006524	Root Summer glycyrrhizin low producing strain	2.070
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.801
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.822

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.192
SRR2868004	Drought Stress (root)	8.519
SRR2967015	Control (root)	9.241

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.062
SRR9715740	Leaf	0.156
SRR9715741	Leaf	0.396
SRR9715739	Root	0.488
SRR9715742	Root	1.543
SRR9715743	Root	1.420

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.066
SRR8749028	MeJA induced 9h	12.230
SRR8749029	MeJA induced 9h	5.917
SRR8749030	Uninduced	0.657
SRR8749031	Uninduced	0.491
SRR8749032	Uninduced	0.625

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.372
SRR8400027	Control - Root	7.863