Gene detail information of Glyur001132s00025472 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14780.1 | 6.00E-138 | MAC/Perforin domain-containing protein |
| NR | XP_004502271.1 | 0 | PREDICTED: MACPF domain-containing protein At1g14780-like [Cicer arietinum] |
| Swissprot | tr|Q8L612|MACP1_ARATH | 2.00E-168 | MACPF domain-containing protein At1g14780 |
| trEMBL | tr|G7JBE0|G7JBE0_MEDTR | 0 | MACPF domain protein {ECO:0000313|EMBL:AES71995.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01132 | 18674 | 23593 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001132s00025472.1 | PF01823.14 | MACPF | 114 | 319 | 9.90E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.775 |
| SRR1783600 | control | 0.852 |
| SRR1783602 | moderate drought stress | 1.116 |
| SRR1811619 | moderate drought stress | 1.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.271 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.174 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.170 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.379 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.355 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.083 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.398 |
| SRR2868004 | Drought Stress (root) | 13.168 |
| SRR2967015 | Control (root) | 6.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.356 |
| SRR9715740 | Leaf | 1.993 |
| SRR9715741 | Leaf | 18.374 |
| SRR9715739 | Root | 1.076 |
| SRR9715742 | Root | 1.821 |
| SRR9715743 | Root | 2.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.156 |
| SRR8749028 | MeJA induced 9h | 1.310 |
| SRR8749029 | MeJA induced 9h | 1.111 |
| SRR8749030 | Uninduced | 1.837 |
| SRR8749031 | Uninduced | 1.944 |
| SRR8749032 | Uninduced | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.638 |
| SRR8400027 | Control - Root | 6.375 |