Gene detail information of Glyur001131s00029298 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G29760.1 | 3.00E-92 | Putative adipose-regulatory protein (Seipin) |
| NR | XP_003524213.1 | 0 | PREDICTED: uncharacterized protein LOC100813988 isoform X1 [Glycine max] |
| trEMBL | tr|K7KQK3|K7KQK3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G29521.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01131 | 38459 | 41049 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001131s00029298.1 | PF06775.9 | Seipin | 250 | 472 | 2.10E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.384 |
| SRR1783600 | control | 2.341 |
| SRR1783602 | moderate drought stress | 3.177 |
| SRR1811619 | moderate drought stress | 3.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.856 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.779 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.689 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.862 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.215 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.273 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.984 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.448 |
| SRR2868004 | Drought Stress (root) | 7.308 |
| SRR2967015 | Control (root) | 7.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.641 |
| SRR9715740 | Leaf | 7.670 |
| SRR9715741 | Leaf | 3.798 |
| SRR9715739 | Root | 2.357 |
| SRR9715742 | Root | 2.253 |
| SRR9715743 | Root | 2.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.055 |
| SRR8749028 | MeJA induced 9h | 8.588 |
| SRR8749029 | MeJA induced 9h | 10.100 |
| SRR8749030 | Uninduced | 5.262 |
| SRR8749031 | Uninduced | 14.282 |
| SRR8749032 | Uninduced | 10.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.717 |
| SRR8400027 | Control - Root | 4.322 |