Gene detail information of Glyur001130s00030901 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13660.1 | 1.00E-75 | |
| NR | KEH42351.1 | 0 | DNA-binding protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VL98|A0A072VL98_MEDTR | 0 | DNA-binding protein, putative {ECO:0000313|EMBL:KEH42351.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01130 | 57734 | 59610 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.670 |
| SRR1783600 | control | 10.579 |
| SRR1783602 | moderate drought stress | 8.250 |
| SRR1811619 | moderate drought stress | 7.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.827 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.119 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.494 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.961 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.359 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.550 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.630 |
| SRR2868004 | Drought Stress (root) | 21.099 |
| SRR2967015 | Control (root) | 17.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.749 |
| SRR9715740 | Leaf | 7.922 |
| SRR9715741 | Leaf | 8.632 |
| SRR9715739 | Root | 2.661 |
| SRR9715742 | Root | 8.699 |
| SRR9715743 | Root | 7.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.535 |
| SRR8749028 | MeJA induced 9h | 29.415 |
| SRR8749029 | MeJA induced 9h | 17.954 |
| SRR8749030 | Uninduced | 10.587 |
| SRR8749031 | Uninduced | 8.700 |
| SRR8749032 | Uninduced | 7.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.997 |
| SRR8400027 | Control - Root | 25.876 |