Gene detail information of Glyur001128s00028301 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07400.1 | 0 | lipase class 3 family protein |
| NR | XP_004510219.1 | 0 | PREDICTED: uncharacterized protein LOC101508920 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7LED8|G7LED8_MEDTR | 0 | Lipase class 3 family protein {ECO:0000313|EMBL:AET01362.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01128 | 43842 | 57977 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001128s00028301.1 | PF01764.20 | Lipase_3 | 184 | 288 | 4.40E-13 |
| Glyur001128s00028301.2 | PF01764.20 | Lipase_3 | 184 | 288 | 4.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.912 |
| SRR1783600 | control | 3.960 |
| SRR1783602 | moderate drought stress | 4.883 |
| SRR1811619 | moderate drought stress | 4.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.981 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.956 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.387 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.165 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.178 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.115 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.059 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.988 |
| SRR2868004 | Drought Stress (root) | 17.691 |
| SRR2967015 | Control (root) | 18.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.554 |
| SRR9715740 | Leaf | 18.142 |
| SRR9715741 | Leaf | 18.644 |
| SRR9715739 | Root | 2.024 |
| SRR9715742 | Root | 7.594 |
| SRR9715743 | Root | 5.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.159 |
| SRR8749028 | MeJA induced 9h | 7.351 |
| SRR8749029 | MeJA induced 9h | 3.087 |
| SRR8749030 | Uninduced | 2.372 |
| SRR8749031 | Uninduced | 1.370 |
| SRR8749032 | Uninduced | 1.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.400 |
| SRR8400027 | Control - Root | 18.608 |