Gene detail information of Glyur001128s00028299.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G25250.11.00E-118AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NRXP_003626900.10Serine/threonine protein kinase OXI1 [Medicago truncatula]
COGYP_827085.16.00E-19serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q9LSF1|OXI1_ARATH6.00E-156Serine/threonine-protein kinase OXI1
trEMBLtr|G7LEF2|G7LEF2_MEDTR0Serine/Threonine-kinase OXI1-like protein {ECO:0000313|EMBL:AET01376.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold011283064732277+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K20714OXI1EC:2.7.11.1MAPK signaling pathway - plantmap04016


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001128s00028299.1PF00069.20Pkinase221843.70E-32
Glyur001128s00028299.1PF00069.20Pkinase2443442.90E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.170
SRR1783600control1.245
SRR1783602moderate drought stress2.094
SRR1811619moderate drought stress2.076

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain75.377
DRR006520Root Summer glycyrrhizin high producing strain74.282
DRR006521Root Winter glycyrrhizin high producing strain0.437
DRR006522Root Winter glycyrrhizin high producing strain0.428
DRR006523Root Summer glycyrrhizin low producing strain77.696
DRR006524Root Summer glycyrrhizin low producing strain77.910
DRR006525Leaf Summer glycyrrhizin high producing strain9.714
DRR006526Leaf Summer glycyrrhizin high producing strain9.553

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)6.005
SRR2868004Drought Stress (root)26.959
SRR2967015Control (root)32.253

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf52.531
SRR9715740Leaf21.984
SRR9715741Leaf36.975
SRR9715739Root380.509
SRR9715742Root552.512
SRR9715743Root500.697

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h309.957
SRR8749028MeJA induced 9h380.709
SRR8749029MeJA induced 9h365.219
SRR8749030Uninduced454.465
SRR8749031Uninduced267.927
SRR8749032Uninduced254.975

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root19.536
SRR8400027Control - Root47.237

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved