Gene detail information of Glyur001126s00037740 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22180.2 | 2.00E-106 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | XP_004513825.1 | 0 | PREDICTED: random slug protein 5-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SCU1|PATL6_ARATH | 7.00E-13 | Patellin-6 |
| trEMBL | tr|I1MAR8|I1MAR8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G34470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01126 | 14757 | 20916 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001126s00037740.1 | PF03765.10 | CRAL_TRIO_N | 24 | 68 | 1.90E-08 |
| Glyur001126s00037740.1 | PF00650.15 | CRAL_TRIO | 90 | 242 | 7.60E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.266 |
| SRR1783600 | control | 17.354 |
| SRR1783602 | moderate drought stress | 14.439 |
| SRR1811619 | moderate drought stress | 14.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.590 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.764 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.356 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.970 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.999 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.935 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.691 |
| SRR2868004 | Drought Stress (root) | 52.387 |
| SRR2967015 | Control (root) | 53.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.475 |
| SRR9715740 | Leaf | 10.256 |
| SRR9715741 | Leaf | 19.931 |
| SRR9715739 | Root | 2.686 |
| SRR9715742 | Root | 10.399 |
| SRR9715743 | Root | 8.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.208 |
| SRR8749028 | MeJA induced 9h | 27.814 |
| SRR8749029 | MeJA induced 9h | 21.451 |
| SRR8749030 | Uninduced | 32.289 |
| SRR8749031 | Uninduced | 42.060 |
| SRR8749032 | Uninduced | 20.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.726 |
| SRR8400027 | Control - Root | 27.425 |