Gene detail

Gene detail information of Glyur001124s00023897

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G02970.1	3.00E-164	WEE1 kinase homolog
NR	XP_003625897.1	0	Wee1-like protein kinase [Medicago truncatula]
COG	YP_004368456.1	7.00E-17	serine/threonine protein kinase [Marinithermus hydrothermalis DSM 14884]
Swissprot	tr\|Q8L4H0\|WEE1_ARATH	0	Wee1-like protein kinase
trEMBL	tr\|G7KRU4\|G7KRU4_MEDTR	0	Wee1-like kinase 1-B {ECO:0000313\|EMBL:AES82115.1}

Sequence

Transcript Sequence

>Glyur001124s00023897.1
ATGAAGACGAAAAGCCATAAGATTGGGAAGAAGAAGGAGAGAAGGAAGATGAAGGGGACGCTAGGTATCAGTAACACCAGACAGTTGCAGCTTCAGCTCAGCCAAGTCTCTCTTTTCCCTCTCCAACCAAAAACAACGGCAACAACTTGCACTTCTTCCGCCGTTCCTCGCTTCCAGAACCTTCTCGACGCCGAGGCCCACGACGACCCTCCCTCTCGCGCTACGGTCACCGATGCCGCCGCCGCAGACGGCAGAGATTTCATTCTCAGCCAGGACTTCTTTTGCACTCCAGATTACATAACCCCGGATAATCAGCATATTTTGAACGGCTTGGATTTCAACAAGGAAAATACCCCGTGCCCCAAATCACCGGAGAAGCTGAATACTACAAAAAGCAAGAGATGCCGACTGGATGGTGTCTCAGTAAACCCTCTGAGCCCCACCTTTTCTAGTGACCATCACCAGGTCGTGGAACTTGGAAAGGACTCTGTTGCAGAGGAAGTAGCTGCTGAGAAAACAACAGCAGCCGGTAAACTGAAGGCCCAGAATTATGTGTCACAATCTGCAATTGCATTGCGTTGCAGGGTCATGCCTCCTCCTTGCATTAGTAACCCCTATTTGATGGATGTTTCACAAAAGGAGACAGATCCCTTTGGAAACCAAAGATCAAAATGTGCAGGTCTCTTCCCTGCAATTACAGGTGGTGATGGGCTTTCACGCTATCGCACTGACTTTCATGAGATTGAGCAAATTGGTAGAGGGAACTTTAGTAGGGTCTTCAAAGTATTAAAGCGAATAGATGGCTGCCTGTATGCTGTGAAACAAAGCACTAGACAGTTACGCCTGGAAACAGAAAGGAGAAAGGCTTTGATGGAAGTTCAAGCTTTGGCAGCCTTAGGTTCCCATGAGAACATTGTGGGGTACTACTCTTCTTGGTTTGAAAATGAACAGCTGTACATTCAGATGGAGCTATGTGANCATAGCTTATCCATAAACAAATGCTCTTCGTTACTAACAGAAGGACAAGTGTTAGAAGCTTTATATCAGGTTGCCAATGCACTGCGATTTGTACACGAGAAGGGAATAGCCCATCTAGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTTCTTGATAATAGCCTGCCAATTGAGGAAGGTGACGCTCGTTATATGCCCCAGGAAATCCTTAATGAGAATTATGATCACCTTGACAAGGTTGATATCTTCTCCTTGGGAGCTTCTATTTATGAACTCATTCGCAGATCGCGTTTGCCAGAATCAGGATGTCAATTTTTTAATCTTAAAGAGGGCAAGTTGCCACTCCTGCCTAGTCATTCGATGCAATTTCAGAACTTGCTCAAGGTGATGATGGACCCTGANCCGGTTAAGAGGCCTTCTGCTGAAGAGTTAGTAGAGAACCCAATTTTTNGCAAGGCCTTAAGAACATCAAAAAGTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01124	68035	71431	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.3.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K06632	WEE1	EC:2.7.11.1	Cell cycle	map04110

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001124s00023897.1	PF00069.20	Pkinase	246	489	6.20E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.706
SRR1783600	control	1.570
SRR1783602	moderate drought stress	0.959
SRR1811619	moderate drought stress	0.992

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.366
DRR006520	Root Summer glycyrrhizin high producing strain	1.370
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.198
DRR006524	Root Summer glycyrrhizin low producing strain	0.220
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.061
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.061

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.987
SRR2868004	Drought Stress (root)	1.920
SRR2967015	Control (root)	2.250

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.378
SRR9715740	Leaf	0.042
SRR9715741	Leaf	0.147
SRR9715739	Root	0.368
SRR9715742	Root	0.692
SRR9715743	Root	0.574

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.840
SRR8749028	MeJA induced 9h	3.110
SRR8749029	MeJA induced 9h	2.879
SRR8749030	Uninduced	0.450
SRR8749031	Uninduced	0.009
SRR8749032	Uninduced	0.295

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.875
SRR8400027	Control - Root	3.122