Gene detail information of Glyur001122s00030610 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24840.1 | 9.00E-159 | Sec14p-like phosphatidylinositol transfer family protein |
| NR | XP_004514271.1 | 0 | PREDICTED: SEC14 cytosolic factor-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|F4J7S8|SFH9_ARATH | 0 | Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 |
| trEMBL | tr|K7MSU9|K7MSU9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G36712.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01122 | 36465 | 44025 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001122s00030610.1 | PF03765.10 | CRAL_TRIO_N | 75 | 121 | 4.50E-10 |
| Glyur001122s00030610.1 | PF00650.15 | CRAL_TRIO | 145 | 288 | 1.80E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.843 |
| SRR1783600 | control | 7.371 |
| SRR1783602 | moderate drought stress | 6.945 |
| SRR1811619 | moderate drought stress | 6.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.188 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.250 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.082 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.097 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.683 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.693 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.711 |
| SRR2868004 | Drought Stress (root) | 21.522 |
| SRR2967015 | Control (root) | 17.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.477 |
| SRR9715740 | Leaf | 8.675 |
| SRR9715741 | Leaf | 11.249 |
| SRR9715739 | Root | 0.720 |
| SRR9715742 | Root | 5.902 |
| SRR9715743 | Root | 5.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.924 |
| SRR8749028 | MeJA induced 9h | 7.372 |
| SRR8749029 | MeJA induced 9h | 6.436 |
| SRR8749030 | Uninduced | 6.758 |
| SRR8749031 | Uninduced | 16.645 |
| SRR8749032 | Uninduced | 5.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.571 |
| SRR8400027 | Control - Root | 20.486 |