Gene detail information of Glyur001120s00031694 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26840.1 | 1.00E-05 | origin recognition complex protein 6 |
| NR | AAZ32886.1 | 5.45E-09 | putative origin recognition complex subunit 6-containing protein [Medicago sativa] |
| Swissprot | tr|Q9ZVH3|ORC6_ARATH | 2.00E-06 | Origin of replication complex subunit 6 {ECO:0000303|PubMed:16179646} |
| trEMBL | tr|Q45NJ6|Q45NJ6_MEDSA | 2.00E-09 | Putative origin recognition complex subunit 6-containing protein {ECO:0000313|EMBL:AAZ32886.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01120 | 62907 | 67184 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.843 |
| SRR1783600 | control | 3.016 |
| SRR1783602 | moderate drought stress | 5.223 |
| SRR1811619 | moderate drought stress | 5.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.742 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.500 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.005 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.986 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.065 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.673 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.938 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.591 |
| SRR2868004 | Drought Stress (root) | 13.559 |
| SRR2967015 | Control (root) | 9.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.836 |
| SRR9715740 | Leaf | 2.250 |
| SRR9715741 | Leaf | 2.104 |
| SRR9715739 | Root | 0.736 |
| SRR9715742 | Root | 4.133 |
| SRR9715743 | Root | 3.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.514 |
| SRR8749028 | MeJA induced 9h | 3.907 |
| SRR8749029 | MeJA induced 9h | 2.477 |
| SRR8749030 | Uninduced | 2.898 |
| SRR8749031 | Uninduced | 1.323 |
| SRR8749032 | Uninduced | 1.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.689 |
| SRR8400027 | Control - Root | 25.357 |