Gene detail

Gene detail information of Glyur001120s00031690

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G01500.1	7.00E-136	thylakoid ATP/ADP carrier
NR	XP_004492441.1	0	PREDICTED: thylakoid ADP,ATP carrier protein, chloroplastic-like isoform X3 [Cicer arietinum]
Swissprot	tr\|O65023\|EAAC_ARATH	1.00E-176	Probable envelope ADP,ATP carrier protein, chloroplastic (Precursor)
trEMBL	tr\|G7KS97\|G7KS97_MEDTR	0	ADP/ATP carrier protein {ECO:0000313\|EMBL:AES79518.2}

Sequence

Transcript Sequence

>Glyur001120s00031690.1
AAACCTGGGAAGTTATTGTGAAGTGACTGTGAGTGAGGGAGTATTTTAAACCCACACACACTCCTTCCTCAGCGCCTTATCTCCTCTCTGCCGCTTCAGAATGTCCATTTCCATGTCCGCCAGAGAGGAGAGAGCCCTAATCTCATGGCACAAAATCCCACACCTCGAATGCGGCGGCGTTTCGCCCAACGCCCATGTCCCTCTCCGGCGGAACTCCACCCTCACTTTCGCCACCGCTGCCGGCGACTCNAAGTTCGCCTGTGTCTCGGTGGCGGAAGCAAAGATGCACCACCATTTTACGCCGACGCCGTCTCAGCTCCTCAAACACCCGCTGGCCGTACTGGCGCTCGTGCCCAGAGATGCCGCTCTCTTCTCCGCCGGAGCTGTCGCCGGTGCCGCCGCCAAGACCTTCACGGCGCCGCTCGACCGTATCAAGCTCCTCATGCAGACTCATGGTGTGCGGGTTGGGCAAGATAATGCCAAGAAGGCAATCAGTTTCATTGAGGCCATAACAGTTATAGGGAAGGAAGAAGGGATTAGAGGTTACTGGAAGGGAAACCTCCCCCAGGTGATTCGGGTTATACCTTATAGTGCNGTCCAGCTTTTTGCTTATGAAATTTATAAGAAAATATTCAGGGGACAAAATGGTGAGCTCTCTGTCGTGGGAAGACTTACAGCAGGTGCTTTTGCTGGGATGACATCCACTTTTATAACTTACCCATTAGATGTTCTGAGATTACGATTAGCCGTTGAACCCGGTTATCNAACCATGTCAGAGGTTGCCTTGAGNATGTTAAGGGAGGAAGGATTTGCATCTTTCTACAGAGGCCTTGGGCCTTCTCTTATTGCAATAGCTCCTTATATTGCAGTGAATTTTTGTGTTTTTGACTTATTAAAGAAGTCATTGCCTGAGAAATACCAAAAGAGAACTGAAACATCTATACTCACTGCGGTGCTTTCGGCATCTCTAGCCACACTTACATGCTATCCTCTGGACACTGTCCGAAGACAAATGCAATTGAAGGGTACACCTTATAAGACAGTATTAGATGCTCTTTCAGGTATTGTGGCACGAGATGGAGTTGCTGGTTTGTATCGGGGATTCGTTCCCAATGCTCTAAAAACCCTACCGAACAGCAGCTTCAAGCTTACCACATATGACATTGTTAAGCGCATAATCGCAGCTNGTGAGAAAGAATTTCAAACAATTACAGAGGAAAATCGCAGCAAACAAAAGAACACCAACAATCAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01120	10789	14826	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001120s00031690.1	PF00153.22	Mito_carr	91	180	2.00E-23
Glyur001120s00031690.1	PF00153.22	Mito_carr	184	271	5.70E-21
Glyur001120s00031690.1	PF00153.22	Mito_carr	280	361	4.80E-20
Glyur001120s00031690.2	PF00153.22	Mito_carr	19	106	1.90E-21
Glyur001120s00031690.2	PF00153.22	Mito_carr	115	196	1.60E-20
Glyur001120s00031690.3	PF00153.22	Mito_carr	91	175	1.30E-22

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	15.645
SRR1783600	control	11.277
SRR1783602	moderate drought stress	29.284
SRR1811619	moderate drought stress	29.340

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.042
DRR006520	Root Summer glycyrrhizin high producing strain	7.883
DRR006521	Root Winter glycyrrhizin high producing strain	3.353
DRR006522	Root Winter glycyrrhizin high producing strain	3.257
DRR006523	Root Summer glycyrrhizin low producing strain	11.878
DRR006524	Root Summer glycyrrhizin low producing strain	12.848
DRR006525	Leaf Summer glycyrrhizin high producing strain	22.197
DRR006526	Leaf Summer glycyrrhizin high producing strain	22.886

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.362
SRR2868004	Drought Stress (root)	6.862
SRR2967015	Control (root)	6.742

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	23.120
SRR9715740	Leaf	38.276
SRR9715741	Leaf	21.217
SRR9715739	Root	5.532
SRR9715742	Root	4.426
SRR9715743	Root	5.223

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.872
SRR8749028	MeJA induced 9h	4.984
SRR8749029	MeJA induced 9h	6.586
SRR8749030	Uninduced	1.054
SRR8749031	Uninduced	0.451
SRR8749032	Uninduced	1.963

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.070
SRR8400027	Control - Root	11.649