Gene detail information of Glyur001119s00040112 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36840.1 | 1.00E-04 | ACT-like superfamily protein |
| NR | XP_010088246.1 | 4.69E-10 | Serine/threonine-protein kinase Nek1 [Morus notabilis] |
| Swissprot | tr|Q9CAU7|NEK2_ARATH | 8.00E-11 | Serine/threonine-protein kinase Nek2 |
| trEMBL | tr|W9SNL8|W9SNL8_9ROSA | 2.00E-10 | Serine/threonine-protein kinase Nek1 {ECO:0000313|EMBL:EXC35900.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01119 | 42747 | 45960 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.034 |
| SRR1783600 | control | 3.382 |
| SRR1783602 | moderate drought stress | 8.234 |
| SRR1811619 | moderate drought stress | 8.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.094 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.081 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.038 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.270 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.774 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.979 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.442 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.556 |
| SRR2868004 | Drought Stress (root) | 8.808 |
| SRR2967015 | Control (root) | 11.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.472 |
| SRR9715740 | Leaf | 7.236 |
| SRR9715741 | Leaf | 2.400 |
| SRR9715739 | Root | 1.215 |
| SRR9715742 | Root | 1.498 |
| SRR9715743 | Root | 1.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.838 |
| SRR8749028 | MeJA induced 9h | 3.932 |
| SRR8749029 | MeJA induced 9h | 3.707 |
| SRR8749030 | Uninduced | 4.250 |
| SRR8749031 | Uninduced | 3.422 |
| SRR8749032 | Uninduced | 2.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.358 |
| SRR8400027 | Control - Root | 10.389 |