Gene detail information of Glyur001118s00030860 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56550.1 | 1.00E-13 | oxidative stress 3 |
| NR | KHN39507.1 | 6.85E-55 | hypothetical protein glysoja_016894 [Glycine soja] |
| trEMBL | tr|I1MBQ1|I1MBQ1_SOYBN | 8.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G38980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01118 | 40615 | 43567 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.021 |
| SRR1783600 | control | 0.021 |
| SRR1783602 | moderate drought stress | 1.384 |
| SRR1811619 | moderate drought stress | 1.413 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.880 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.685 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 116.515 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 111.771 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.847 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.730 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.441 |
| SRR2868004 | Drought Stress (root) | 1.262 |
| SRR2967015 | Control (root) | 3.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.688 |
| SRR9715740 | Leaf | 0.199 |
| SRR9715741 | Leaf | 1.044 |
| SRR9715739 | Root | 0.143 |
| SRR9715742 | Root | 0.359 |
| SRR9715743 | Root | 0.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.995 |
| SRR8749028 | MeJA induced 9h | 11.825 |
| SRR8749029 | MeJA induced 9h | 4.030 |
| SRR8749030 | Uninduced | 15.485 |
| SRR8749031 | Uninduced | 40.273 |
| SRR8749032 | Uninduced | 60.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.823 |
| SRR8400027 | Control - Root | 1.247 |