Gene detail information of Glyur001118s00030858 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G51990.1 | 2.00E-15 | O-methyltransferase family protein |
| NR | KHN19130.1 | 5.30E-50 | 8-hydroxyquercetin 8-O-methyltransferase [Glycine soja] |
| COG | YP_006433319.1 | 4.00E-16 | methylase involved in ubiquinone/menaquinone biosynthesis [Flexibacter litoralis DSM 6794] |
| Swissprot | tr|B6VJS4|ROMT_VITVI | 1.00E-37 | Trans-resveratrol di-O-methyltransferase |
| trEMBL | tr|G7KFJ3|G7KFJ3_MEDTR | 4.00E-50 | Orcinol O-methyltransferase {ECO:0000313|EMBL:AES98924.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01118 | 31109 | 31426 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001118s00030858.1 | PF00891.13 | Methyltransf_2 | 5 | 82 | 9.90E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.405 |
| SRR1783600 | control | 0.664 |
| SRR1783602 | moderate drought stress | 0.294 |
| SRR1811619 | moderate drought stress | 0.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.108 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.646 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.244 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.951 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.153 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.177 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.098 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.265 |
| SRR2868004 | Drought Stress (root) | 0.597 |
| SRR2967015 | Control (root) | 0.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.447 |
| SRR9715740 | Leaf | 0.892 |
| SRR9715741 | Leaf | 0.875 |
| SRR9715739 | Root | 0.707 |
| SRR9715742 | Root | 0.227 |
| SRR9715743 | Root | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.201 |
| SRR8749028 | MeJA induced 9h | 0.389 |
| SRR8749029 | MeJA induced 9h | 1.684 |
| SRR8749030 | Uninduced | 0.479 |
| SRR8749031 | Uninduced | 1.463 |
| SRR8749032 | Uninduced | 5.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.585 |
| SRR8400027 | Control - Root | 0.379 |