Gene detail information of Glyur001117s00026960 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49310.1 | 1.00E-07 | |
| NR | NP_001239672.1 | 3.68E-47 | uncharacterized protein LOC100794634 precursor [Glycine max] |
| trEMBL | tr|C6TN67|C6TN67_SOYBN | 1.00E-47 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU24359.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01117 | 69226 | 69979 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001117s00026960.1 | PF10950.3 | DUF2775 | 33 | 107 | 5.80E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.380 |
| SRR1783600 | control | 0.316 |
| SRR1783602 | moderate drought stress | 0.132 |
| SRR1811619 | moderate drought stress | 0.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.163 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.787 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.191 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.187 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.254 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.258 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.578 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.733 |
| SRR2868004 | Drought Stress (root) | 64.503 |
| SRR2967015 | Control (root) | 53.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.113 |
| SRR9715740 | Leaf | 3.607 |
| SRR9715741 | Leaf | 2.899 |
| SRR9715739 | Root | 0.465 |
| SRR9715742 | Root | 10.206 |
| SRR9715743 | Root | 10.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.346 |
| SRR8749028 | MeJA induced 9h | 0.582 |
| SRR8749029 | MeJA induced 9h | 0.739 |
| SRR8749030 | Uninduced | 1.618 |
| SRR8749031 | Uninduced | 0.132 |
| SRR8749032 | Uninduced | 0.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 67.493 |
| SRR8400027 | Control - Root | 30.475 |