Gene detail information of Glyur001117s00026959 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49320.1 | 5.00E-55 | unknown seed protein like 1 |
| NR | AFK43537.1 | 3.44E-156 | unknown [Medicago truncatula] |
| Swissprot | tr|Q942D4|BURP3_ORYSJ | 2.00E-57 | BURP domain-containing protein 3 (Precursor) |
| trEMBL | tr|I3STE5|I3STE5_MEDTR | 1.00E-156 | Uncharacterized protein {ECO:0000313|EMBL:AFK43537.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01117 | 66303 | 67364 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001117s00026959.1 | PF03181.10 | BURP | 80 | 299 | 9.30E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 463.419 |
| SRR1783600 | control | 466.445 |
| SRR1783602 | moderate drought stress | 182.897 |
| SRR1811619 | moderate drought stress | 182.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 138.478 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 138.074 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.341 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.598 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.378 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.500 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 541.190 |
| SRR2868004 | Drought Stress (root) | 415.896 |
| SRR2967015 | Control (root) | 459.636 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.219 |
| SRR9715740 | Leaf | 0.509 |
| SRR9715741 | Leaf | 0.294 |
| SRR9715739 | Root | 80.800 |
| SRR9715742 | Root | 206.468 |
| SRR9715743 | Root | 171.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.076 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 665.743 |
| SRR8400027 | Control - Root | 642.697 |