Gene detail information of Glyur001117s00026958 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003606883.1 | 2.53E-47 | Organ-specific protein S2 [Medicago truncatula] |
| Swissprot | tr|P17772|OSS2_PEA | 6.00E-21 | Organ-specific protein S2 |
| trEMBL | tr|G7JG40|G7JG40_MEDTR | 1.00E-44 | Specific tissue protein {ECO:0000313|EMBL:AES89080.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01117 | 59678 | 61033 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001117s00026958.1 | PF10950.3 | DUF2775 | 25 | 128 | 2.10E-23 |
| Glyur001117s00026958.1 | PF10950.3 | DUF2775 | 126 | 169 | 6.80E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 397.662 |
| SRR1783600 | control | 397.772 |
| SRR1783602 | moderate drought stress | 121.673 |
| SRR1811619 | moderate drought stress | 119.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.737 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.150 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.302 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.534 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 214.493 |
| SRR2868004 | Drought Stress (root) | 278.753 |
| SRR2967015 | Control (root) | 495.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.045 |
| SRR9715740 | Leaf | 0.167 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 34.799 |
| SRR9715742 | Root | 204.501 |
| SRR9715743 | Root | 169.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1361.152 |
| SRR8400027 | Control - Root | 1622.093 |