Gene detail information of Glyur001114s00030050


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30040.14.00E-59gibberellin 2-oxidase
NRXP_003593922.16.42E-116Gibberellin 2-oxidase [Medicago truncatula]
Swissprottr|Q9XG83|G2OX_PHACN6.00E-113Gibberellin 2-beta-dioxygenase
trEMBLtr|G7IPV5|G7IPV5_MEDTR2.00E-116Plant gibberellin 2-oxidase {ECO:0000313|EMBL:AES64173.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold011148394285727-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K04125E1.14.11.13EC:1.14.11.13Diterpenoid biosynthesismap00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001114s00030050.1PF03171.152OG-FeII_Oxy1291582.40E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.248
SRR1783600control0.114
SRR1783602moderate drought stress0.324
SRR1811619moderate drought stress0.244

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.157
DRR006520Root Summer glycyrrhizin high producing strain0.267
DRR006521Root Winter glycyrrhizin high producing strain0.443
DRR006522Root Winter glycyrrhizin high producing strain0.407
DRR006523Root Summer glycyrrhizin low producing strain0.094
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain2.334
DRR006526Leaf Summer glycyrrhizin high producing strain2.118

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)0.372
SRR2868004Drought Stress (root)0.362
SRR2967015Control (root)0.229

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf2.889
SRR9715740Leaf0.972
SRR9715741Leaf2.993
SRR9715739Root0.000
SRR9715742Root5.930
SRR9715743Root4.284

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.386
SRR8749028MeJA induced 9h12.679
SRR8749029MeJA induced 9h7.525
SRR8749030Uninduced180.398
SRR8749031Uninduced56.876
SRR8749032Uninduced48.771

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root3.221
SRR8400027Control - Root0.681

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved