Gene detail information of Glyur001114s00030041 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34585.1 | 3.00E-13 | |
| NR | XP_003593909.1 | 1.36E-30 | hypothetical protein MTR_2g019240 [Medicago truncatula] |
| trEMBL | tr|G7IP75|G7IP75_MEDTR | 5.00E-31 | Transmembrane protein, putative {ECO:0000313|EMBL:AES64160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01114 | 29275 | 29499 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 106.919 |
| SRR1783600 | control | 121.039 |
| SRR1783602 | moderate drought stress | 123.101 |
| SRR1811619 | moderate drought stress | 126.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 73.332 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.975 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 69.190 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 68.265 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 147.420 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 157.571 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 65.562 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 65.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 148.580 |
| SRR2868004 | Drought Stress (root) | 134.938 |
| SRR2967015 | Control (root) | 122.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 92.672 |
| SRR9715740 | Leaf | 72.631 |
| SRR9715741 | Leaf | 81.729 |
| SRR9715739 | Root | 36.922 |
| SRR9715742 | Root | 55.907 |
| SRR9715743 | Root | 57.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.643 |
| SRR8749028 | MeJA induced 9h | 45.932 |
| SRR8749029 | MeJA induced 9h | 46.386 |
| SRR8749030 | Uninduced | 26.458 |
| SRR8749031 | Uninduced | 4.983 |
| SRR8749032 | Uninduced | 15.290 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 204.762 |
| SRR8400027 | Control - Root | 196.755 |