Gene detail information of Glyur001114s00030036 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30130.2 | 5.00E-97 | |
| NR | XP_004486016.1 | 0 | PREDICTED: uncharacterized protein LOC101511694 [Cicer arietinum] |
| COG | YP_003051073.1 | 8.00E-23 | hypothetical protein Msip34_1300 [Methylovorus glucosetrophus SIP3-4] |
| trEMBL | tr|I1M1G4|I1M1G4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G29060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01114 | 12953 | 15782 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001114s00030036.1 | PF07103.6 | DUF1365 | 51 | 86 | 1.40E-09 |
| Glyur001114s00030036.1 | PF07103.6 | DUF1365 | 98 | 258 | 9.30E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.454 |
| SRR1783600 | control | 6.411 |
| SRR1783602 | moderate drought stress | 5.610 |
| SRR1811619 | moderate drought stress | 5.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.834 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.537 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.028 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.151 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.315 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.317 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.035 |
| SRR2868004 | Drought Stress (root) | 6.765 |
| SRR2967015 | Control (root) | 5.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.170 |
| SRR9715740 | Leaf | 40.060 |
| SRR9715741 | Leaf | 20.592 |
| SRR9715739 | Root | 4.073 |
| SRR9715742 | Root | 2.485 |
| SRR9715743 | Root | 3.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.448 |
| SRR8749028 | MeJA induced 9h | 4.647 |
| SRR8749029 | MeJA induced 9h | 2.211 |
| SRR8749030 | Uninduced | 3.973 |
| SRR8749031 | Uninduced | 1.676 |
| SRR8749032 | Uninduced | 1.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.223 |
| SRR8400027 | Control - Root | 6.365 |