Gene detail information of Glyur001114s00030034 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30190.1 | 7.00E-16 | |
| NR | XP_003593901.1 | 3.09E-101 | hypothetical protein MTR_2g019160 [Medicago truncatula] |
| trEMBL | tr|G7IP67|G7IP67_MEDTR | 1.00E-101 | Transmembrane protein, putative {ECO:0000313|EMBL:AES64152.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01114 | 1768 | 2634 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001114s00030034.1 | PF05553.6 | DUF761 | 262 | 283 | 2.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.892 |
| SRR1783600 | control | 2.066 |
| SRR1783602 | moderate drought stress | 5.411 |
| SRR1811619 | moderate drought stress | 5.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.954 |
| SRR2868004 | Drought Stress (root) | 8.509 |
| SRR2967015 | Control (root) | 3.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.022 |
| SRR9715740 | Leaf | 0.023 |
| SRR9715741 | Leaf | 0.030 |
| SRR9715739 | Root | 0.057 |
| SRR9715742 | Root | 0.498 |
| SRR9715743 | Root | 0.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.098 |
| SRR8749028 | MeJA induced 9h | 2.955 |
| SRR8749029 | MeJA induced 9h | 0.430 |
| SRR8749030 | Uninduced | 0.135 |
| SRR8749031 | Uninduced | 0.066 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.763 |
| SRR8400027 | Control - Root | 9.986 |