Gene detail information of Glyur001113s00028462 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02340.1 | 1.00E-51 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004494384.1 | 4.56E-87 | PREDICTED: bifunctional epoxide hydrolase 2-like [Cicer arietinum] |
| COG | YP_629896.1 | 5.00E-43 | epoxide hydrolase [Myxococcus xanthus DK 1622] |
| trEMBL | tr|I1NB79|I1NB79_SOYBN | 3.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39950.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01113 | 73631 | 74137 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001113s00028462.1 | PF12697.2 | Abhydrolase_6 | 24 | 146 | 5.60E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.668 |
| SRR1783600 | control | 11.124 |
| SRR1783602 | moderate drought stress | 18.265 |
| SRR1811619 | moderate drought stress | 16.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.145 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.516 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.162 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.682 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.695 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.456 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.954 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.257 |
| SRR2868004 | Drought Stress (root) | 7.976 |
| SRR2967015 | Control (root) | 6.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.687 |
| SRR9715740 | Leaf | 2.634 |
| SRR9715741 | Leaf | 1.888 |
| SRR9715739 | Root | 0.216 |
| SRR9715742 | Root | 1.549 |
| SRR9715743 | Root | 1.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.150 |
| SRR8749028 | MeJA induced 9h | 0.145 |
| SRR8749029 | MeJA induced 9h | 0.076 |
| SRR8749030 | Uninduced | 0.144 |
| SRR8749031 | Uninduced | 0.027 |
| SRR8749032 | Uninduced | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.147 |
| SRR8400027 | Control - Root | 8.417 |