Gene detail

Gene detail information of Glyur001112s00036227.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G17040.1	4.00E-89	NAC domain containing protein 36
NR	XP_004505672.1	2.26E-173	PREDICTED: protein FEZ-like [Cicer arietinum]
Swissprot	tr\|Q9FIW5\|NAC94_ARATH	4.00E-53	Putative NAC domain-containing protein 94
trEMBL	tr\|C7AFG3\|C7AFG3_CICAR	5.00E-173	NAC family transcription factor 6 {ECO:0000313\|EMBL:ACS94039.1}

Sequence

Transcript Sequence

>Glyur001112s00036227.1
TGTTAATAATCGAAATATAAAATTCACCAATTAACTCGATCACCACACCAACCATTCCTTATAAATATACACACTCCCATTCACATGTTCATCATCTTTCCAAAGTGTTTGCATAAGTAGAGCAACTCTTCAGTTTTGTGTTTTCTCTGAAGCAAAAGAAACCCCCCCTCAAAAAAAAAAAAAGGGTGAACACTGCAGTAACACTAGCTAGCAGAAAACATATATTGATAATAATACATGGAAGACATCAACATGAGTAGTGAGGAGATTGCTCTCCCAGGGTTCAGATTTCACCCCACAGAAGAAGAACTCCTCGATTTCTATCTCAAAAACATGGTCGTGGGCAAGAAACTTCGCTATGATGTCATCGGTTTCCTTAACATCTATCACCATGATCCCTGGGTCCTGCCTGATTTGGCAAAGGTTGGGGAAAGAGAATGGTATTTCTTCGTGCCGAGGGACAAGAAACATGGGAGTGGGGGAAGGCCAAACCGCACCACAGAAAAGGGGTTCTGGAAAGCCACCGGTTCAGACCGGAAAATCGTGACCCTGTCAGATCCAAAGCGCATAATCGGGTTGAGGAAGACACTGGTTTTCTATGAGGGAAGAGCTCCACGTGGATGCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTCCCCATTGCCTAAGGACATAGTGTTATGCAAGATATATAGAAAGGCAACTTCGTTGAAAGTGCTAGAGGAAAGAGCAGCAAGAGAGGAAGAGATGAAGCAATTGGTGGGTTCCCCTGAGTCCCCACCTTCATCCACAGACACCATGTCCTTTATTAGCAGCCCCCAGCAACACGTGGTGGTTCTGAAGAAAGAATCTGAAACCGAAGAAATGGTGTCTATGCCAAGGCTAGAAAAAACAAAGAGCCAATTGCTTGTGAAAGACAACAAAACCACTTGTTGTGGAACATCCCTTCAATTGCCTTTGGGGAAAGACAAGTTGCCAGAGCTTCAGCTACCCATGACAGCGGATTGGACCCAAGATACCTTTTGGGCCCAATTGAACAGCCCATGGCTTCAAAATTGGACTGCTTACTCCAACATCTTAAACTTCTAATAATGACTCTATTATTATCAACTGCAACTTAGTTATTATATGTGTTTATTTTGGAATATGTATATGCAGTCAATTTAATTAATAACGTAAATCATATNATTAGCTTATTTGTTTAGGAAGGTCCATCCGTACATTTTAATTTTTAAGTTGTGCCTAGTCGGAACTTGACAACACTTCCACCCCNGCCCATTTGATTGATGATGTAATGATGTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01112	43592	45923	+

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001112s00036227.1	PF02365.10	NAM	13	140	4.60E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	86.287
SRR1783600	control	87.460
SRR1783602	moderate drought stress	23.170
SRR1811619	moderate drought stress	22.745

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	134.563
DRR006520	Root Summer glycyrrhizin high producing strain	134.036
DRR006521	Root Winter glycyrrhizin high producing strain	0.168
DRR006522	Root Winter glycyrrhizin high producing strain	0.164
DRR006523	Root Summer glycyrrhizin low producing strain	251.214
DRR006524	Root Summer glycyrrhizin low producing strain	253.330
DRR006525	Leaf Summer glycyrrhizin high producing strain	159.555
DRR006526	Leaf Summer glycyrrhizin high producing strain	159.334

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.834
SRR2868004	Drought Stress (root)	10.578
SRR2967015	Control (root)	16.218

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	453.728
SRR9715740	Leaf	545.407
SRR9715741	Leaf	419.403
SRR9715739	Root	123.271
SRR9715742	Root	195.444
SRR9715743	Root	173.500

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	43.616
SRR8749028	MeJA induced 9h	25.522
SRR8749029	MeJA induced 9h	40.108
SRR8749030	Uninduced	36.717
SRR8749031	Uninduced	6.450
SRR8749032	Uninduced	2.921

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.641
SRR8400027	Control - Root	35.905