Gene detail information of Glyur001109s00030199 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19875.1 | 2.00E-14 | |
| NR | XP_003616787.1 | 1.17E-44 | hypothetical protein MTR_5g084250 [Medicago truncatula] |
| trEMBL | tr|G7KH57|G7KH57_MEDTR | 4.00E-45 | Uncharacterized protein {ECO:0000313|EMBL:AFK46873.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01109 | 36709 | 37008 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.073 |
| SRR1783600 | control | 0.479 |
| SRR1783602 | moderate drought stress | 14.788 |
| SRR1811619 | moderate drought stress | 13.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.888 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.993 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.698 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.726 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.037 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.734 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.708 |
| SRR2868004 | Drought Stress (root) | 2.955 |
| SRR2967015 | Control (root) | 6.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.947 |
| SRR9715740 | Leaf | 8.276 |
| SRR9715741 | Leaf | 3.974 |
| SRR9715739 | Root | 1.550 |
| SRR9715742 | Root | 12.332 |
| SRR9715743 | Root | 10.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.763 |
| SRR8749028 | MeJA induced 9h | 6.012 |
| SRR8749029 | MeJA induced 9h | 10.096 |
| SRR8749030 | Uninduced | 0.047 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.392 |
| SRR8400027 | Control - Root | 7.055 |