Gene detail information of Glyur001107s00036924 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14450.1 | 9.00E-72 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| NR | KHN27567.1 | 8.93E-146 | GDSL esterase/lipase [Glycine soja] |
| Swissprot | tr|Q9LY84|GDL76_ARATH | 7.00E-94 | GDSL esterase/lipase At5g14450 (Precursor) |
| trEMBL | tr|I1MLS6|I1MLS6_SOYBN | 2.00E-145 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G07430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01107 | 65053 | 66595 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001107s00036924.1 | PF00657.17 | Lipase_GDSL | 67 | 238 | 6.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.618 |
| SRR1783600 | control | 1.140 |
| SRR1783602 | moderate drought stress | 0.324 |
| SRR1811619 | moderate drought stress | 0.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.958 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.764 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.289 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.958 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.538 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.866 |
| SRR2868004 | Drought Stress (root) | 5.417 |
| SRR2967015 | Control (root) | 10.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.341 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.172 |
| SRR9715739 | Root | 0.729 |
| SRR9715742 | Root | 2.144 |
| SRR9715743 | Root | 2.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.144 |
| SRR8749028 | MeJA induced 9h | 17.013 |
| SRR8749029 | MeJA induced 9h | 8.676 |
| SRR8749030 | Uninduced | 21.504 |
| SRR8749031 | Uninduced | 19.441 |
| SRR8749032 | Uninduced | 13.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.472 |
| SRR8400027 | Control - Root | 4.757 |