Gene detail information of Glyur001106s00033799 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G49040.1 | 3.00E-41 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | KEH41749.1 | 3.27E-84 | disease resistance response protein [Medicago truncatula] |
| Swissprot | tr|Q9FI66|DIR3_ARATH | 8.00E-52 | Dirigent protein 3 (Precursor) |
| trEMBL | tr|A0A072VI95|A0A072VI95_MEDTR | 1.00E-84 | Disease resistance response protein {ECO:0000313|EMBL:KEH41749.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01106 | 53568 | 55904 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001106s00033799.1 | PF03018.9 | Dirigent | 53 | 175 | 2.40E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.808 |
| SRR1783600 | control | 44.727 |
| SRR1783602 | moderate drought stress | 55.623 |
| SRR1811619 | moderate drought stress | 51.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.831 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.521 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.605 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.698 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.112 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 85.430 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 84.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.162 |
| SRR2868004 | Drought Stress (root) | 34.584 |
| SRR2967015 | Control (root) | 28.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.325 |
| SRR9715740 | Leaf | 14.408 |
| SRR9715741 | Leaf | 23.906 |
| SRR9715739 | Root | 69.101 |
| SRR9715742 | Root | 13.622 |
| SRR9715743 | Root | 26.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.962 |
| SRR8749028 | MeJA induced 9h | 0.739 |
| SRR8749029 | MeJA induced 9h | 0.811 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.018 |
| SRR8749032 | Uninduced | 0.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.990 |
| SRR8400027 | Control - Root | 28.826 |