Gene detail

Gene detail information of Glyur001104s00026660

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G23010.1	4.00E-135	UDP-galactose transporter 2
NR	XP_003534587.1	0	PREDICTED: UDP-galactose/UDP-glucose transporter 2-like isoform 1 [Glycine max]
Swissprot	tr\|Q29Q28\|UTR2_ARATH	9.00E-169	UDP-galactose/UDP-glucose transporter 2
trEMBL	tr\|I1L6P8\|I1L6P8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G39980.3}

Sequence

Transcript Sequence

>Glyur001104s00026660.1
ACCCAGTTGGAGGAGCTTAGTGACTGAGCAGCTAGTGATGGCAAACCCAGAGCAAGCTCGTACTTTGTTTGGAGTTTCTCTCTCAGACAGACCCAGATGGCAACAATTCATCATTTGTTCTTCTGGCTTCTTCTTTGGATATCTTGTTAATGGCATCTGCGAGGAATATGTGTATAACAGGCTTCATTTTAGCTATGGTTGGTACTTCACCTTTGTTCAAGGGTTTGTTTACTTGTGTCTGATTTACCTCCAAGGCTTCACAAGCAAGCAAATGGTGAACCCGTGGAAAACTTATGTGAAGCTTTCTGCTGTACTTATGGGTTCCCATGGCCTAACAAAGGGATCTTTGGCTTTTCTCAACTACCCTGCACAGATCATGTTCAAATCCACAAAGGTTCTTCCAGTGATGGTAATGGGTGCCTTCATACCAGGTCTGAGAAGGAAATACCCATTTCATGAATATATATCTGCTGCACTTCTGGTAATTGGCTTGATCCTATTCACACTAGCAGATGCACAGACATCACCCAATTTCAGTGTCATAGGTATGGAGATGCTGTTCTGCTCTACTGTAGTGGGTTTGCCTTTCTTAATCCCACCCATGCTTTTCACAGGAGAGTTATTCAATGCATGGACTTCATGTTCACAGCATCCCTATGTGTATGGAGTGTTGATATTTGAAGCAATGGCCACATTTATTGGCCAAGTCTCTGTGCTGTCACTGATTGCCATTTTTGGAGCTGCCACTACAGCCATGATAACAACGGCTAGAAAGGCAGTGACATTGCTACTGTCATATCTGATATTTACAAAACCAATGACAGAACAGCATGGGAGTGGACTTCTACTCATAGCAATGGGGATCACATTGAAGATATTTCTTGATGAGAAATCCACCAAGAGGGCCTTAAACTCTTCTAACAGTGCCAATATTCCAAAACCTTCTGGTGACAAAGAACTGAGGGCACAACCAGATTATGTAGGAAAAGATGAGGAAAGAAGACCATTGGTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01104	45535	48247	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055085 transmembrane transport

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001104s00026660.1	PF08449.6	UAA	24	167	3.70E-39
Glyur001104s00026660.1	PF08449.6	UAA	171	285	2.90E-28

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.688
SRR1783600	control	0.679
SRR1783602	moderate drought stress	0.883
SRR1811619	moderate drought stress	0.900

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.337
SRR2868004	Drought Stress (root)	1.926
SRR2967015	Control (root)	1.150

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.690
SRR9715740	Leaf	0.062
SRR9715741	Leaf	0.230
SRR9715739	Root	3.087
SRR9715742	Root	1.898
SRR9715743	Root	1.598

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.945
SRR8749028	MeJA induced 9h	12.645
SRR8749029	MeJA induced 9h	1.367
SRR8749030	Uninduced	3.690
SRR8749031	Uninduced	0.385
SRR8749032	Uninduced	1.503

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.117
SRR8400027	Control - Root	3.414