Gene detail information of Glyur001101s00022424 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G30755.1 | 6.00E-147 | Protein of unknown function (DUF668) |
| NR | XP_004500936.1 | 0 | PREDICTED: uncharacterized protein LOC101505557 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7KHR0|K7KHR0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02600.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01101 | 24351 | 29653 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001101s00022424.1 | PF11961.3 | DUF3475 | 124 | 178 | 6.40E-23 |
| Glyur001101s00022424.1 | PF05003.7 | DUF668 | 342 | 419 | 1.20E-21 |
| Glyur001101s00022424.2 | PF11961.3 | DUF3475 | 124 | 178 | 6.20E-23 |
| Glyur001101s00022424.2 | PF05003.7 | DUF668 | 342 | 427 | 5.70E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.728 |
| SRR1783600 | control | 4.739 |
| SRR1783602 | moderate drought stress | 6.484 |
| SRR1811619 | moderate drought stress | 6.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.116 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.675 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.937 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.121 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.114 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.041 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.851 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.462 |
| SRR2868004 | Drought Stress (root) | 44.149 |
| SRR2967015 | Control (root) | 38.950 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 112.866 |
| SRR9715740 | Leaf | 70.518 |
| SRR9715741 | Leaf | 148.144 |
| SRR9715739 | Root | 2.976 |
| SRR9715742 | Root | 22.124 |
| SRR9715743 | Root | 17.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 49.500 |
| SRR8749028 | MeJA induced 9h | 74.867 |
| SRR8749029 | MeJA induced 9h | 54.593 |
| SRR8749030 | Uninduced | 80.376 |
| SRR8749031 | Uninduced | 124.379 |
| SRR8749032 | Uninduced | 75.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.481 |
| SRR8400027 | Control - Root | 24.307 |