Gene detail information of Glyur001101s00022418.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24200.1 | 4.00E-53 | Transcription elongation factor (TFIIS) family protein |
| NR | XP_006577965.1 | 0 | PREDICTED: dentin sialophosphoprotein-like [Glycine max] |
| trEMBL | tr|K7KHQ9|K7KHQ9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02570.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01101 | 2 | 1843 | + |
Gene family
| Gene family | subfamily |
|---|---|
| EAR motif-containing Proteins | other |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.560 |
| SRR1783600 | control | 8.812 |
| SRR1783602 | moderate drought stress | 9.732 |
| SRR1811619 | moderate drought stress | 10.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.377 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.471 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.206 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.946 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.036 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.810 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.713 |
| SRR2868004 | Drought Stress (root) | 19.617 |
| SRR2967015 | Control (root) | 20.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.269 |
| SRR9715740 | Leaf | 18.677 |
| SRR9715741 | Leaf | 17.537 |
| SRR9715739 | Root | 7.696 |
| SRR9715742 | Root | 17.336 |
| SRR9715743 | Root | 14.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 22.773 |
| SRR8749028 | MeJA induced 9h | 23.999 |
| SRR8749029 | MeJA induced 9h | 26.171 |
| SRR8749030 | Uninduced | 14.363 |
| SRR8749031 | Uninduced | 19.447 |
| SRR8749032 | Uninduced | 26.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.245 |
| SRR8400027 | Control - Root | 11.729 |