Gene detail information of Glyur001100s00028603 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004490580.1 | 1.20E-110 | PREDICTED: uro-adherence factor A-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|G7K6A1|G7K6A1_MEDTR | 8.00E-107 | Transmembrane protein, putative {ECO:0000313|EMBL:AES98539.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01100 | 42993 | 45336 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.277 |
| SRR1783600 | control | 1.244 |
| SRR1783602 | moderate drought stress | 1.118 |
| SRR1811619 | moderate drought stress | 1.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.077 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.001 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.476 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.535 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.671 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.681 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.058 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.194 |
| SRR2868004 | Drought Stress (root) | 0.909 |
| SRR2967015 | Control (root) | 1.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.779 |
| SRR9715740 | Leaf | 3.367 |
| SRR9715741 | Leaf | 2.414 |
| SRR9715739 | Root | 0.031 |
| SRR9715742 | Root | 0.228 |
| SRR9715743 | Root | 0.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.882 |
| SRR8749028 | MeJA induced 9h | 0.431 |
| SRR8749029 | MeJA induced 9h | 0.748 |
| SRR8749030 | Uninduced | 0.808 |
| SRR8749031 | Uninduced | 0.457 |
| SRR8749032 | Uninduced | 0.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.201 |
| SRR8400027 | Control - Root | 3.159 |