Gene detail information of Glyur001099s00027734 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G36660.1 | 5.00E-09 | Protein of unknown function (DUF1195) |
| NR | NP_001241923.1 | 6.77E-18 | uncharacterized protein LOC100803339 [Glycine max] |
| trEMBL | tr|C6T6W9|C6T6W9_SOYBN | 3.00E-18 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU17571.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01099 | 81968 | 85171 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001099s00027734.1 | PF06708.6 | DUF1195 | 38 | 99 | 6.30E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.000 |
| SRR1783600 | control | 0.463 |
| SRR1783602 | moderate drought stress | 1.795 |
| SRR1811619 | moderate drought stress | 1.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.371 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.792 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.776 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.241 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.548 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.531 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.285 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.028 |
| SRR2868004 | Drought Stress (root) | 1.403 |
| SRR2967015 | Control (root) | 1.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.888 |
| SRR9715740 | Leaf | 1.439 |
| SRR9715741 | Leaf | 1.192 |
| SRR9715739 | Root | 0.432 |
| SRR9715742 | Root | 1.481 |
| SRR9715743 | Root | 0.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.621 |
| SRR8749028 | MeJA induced 9h | 0.169 |
| SRR8749029 | MeJA induced 9h | 0.340 |
| SRR8749030 | Uninduced | 0.192 |
| SRR8749031 | Uninduced | 0.119 |
| SRR8749032 | Uninduced | 0.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.544 |
| SRR8400027 | Control - Root | 6.080 |