Gene detail information of Glyur001099s00027729 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42960.1 | 5.00E-82 | |
| NR | O49929.1 | 2.26E-128 | RecName: Full=Outer envelope pore protein 24, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 24 kDa [Pisum sativum] |
| Swissprot | tr|O49929|OEP24_PEA | 1.00E-130 | Outer envelope pore protein 24, chloroplastic |
| trEMBL | tr|V7CTR1|V7CTR1_PHAVU | 5.00E-127 | Uncharacterized protein {ECO:0000313|EMBL:ESW32763.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01099 | 63098 | 65912 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.028 |
| SRR1783600 | control | 19.755 |
| SRR1783602 | moderate drought stress | 24.992 |
| SRR1811619 | moderate drought stress | 27.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.863 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.883 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.219 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.271 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.901 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.812 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 79.166 |
| SRR2868004 | Drought Stress (root) | 110.513 |
| SRR2967015 | Control (root) | 87.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.234 |
| SRR9715740 | Leaf | 66.057 |
| SRR9715741 | Leaf | 71.915 |
| SRR9715739 | Root | 74.800 |
| SRR9715742 | Root | 56.719 |
| SRR9715743 | Root | 56.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 66.416 |
| SRR8749028 | MeJA induced 9h | 76.569 |
| SRR8749029 | MeJA induced 9h | 57.498 |
| SRR8749030 | Uninduced | 71.557 |
| SRR8749031 | Uninduced | 78.447 |
| SRR8749032 | Uninduced | 91.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 91.943 |
| SRR8400027 | Control - Root | 70.910 |