Gene detail information of Glyur001099s00027720 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47740.2 | 6.00E-84 | PPPDE putative thiol peptidase family protein |
| NR | XP_004499134.1 | 2.74E-171 | PREDICTED: deSI-like protein At4g17486-like [Cicer arietinum] |
| Swissprot | tr|Q93VG8|PPDEX_ARATH | 4.00E-66 | DeSI-like protein At4g17486 |
| trEMBL | tr|I1MXV1|I1MXV1_SOYBN | 2.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01099 | 21668 | 24030 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001099s00027720.1 | PF05903.9 | Peptidase_C97 | 42 | 167 | 2.60E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.737 |
| SRR1783600 | control | 16.601 |
| SRR1783602 | moderate drought stress | 9.059 |
| SRR1811619 | moderate drought stress | 8.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.661 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.661 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.213 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.116 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.427 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.385 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.335 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.976 |
| SRR2868004 | Drought Stress (root) | 14.093 |
| SRR2967015 | Control (root) | 15.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.039 |
| SRR9715740 | Leaf | 8.848 |
| SRR9715741 | Leaf | 7.402 |
| SRR9715739 | Root | 7.919 |
| SRR9715742 | Root | 9.586 |
| SRR9715743 | Root | 7.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.842 |
| SRR8749028 | MeJA induced 9h | 3.682 |
| SRR8749029 | MeJA induced 9h | 6.330 |
| SRR8749030 | Uninduced | 0.899 |
| SRR8749031 | Uninduced | 0.621 |
| SRR8749032 | Uninduced | 1.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.460 |
| SRR8400027 | Control - Root | 29.075 |