Gene detail information of Glyur001096s00036250 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04700.1 | 3.00E-21 | Ankyrin repeat family protein |
| NR | XP_004490675.1 | 6.39E-53 | PREDICTED: uncharacterized protein LOC101503260 [Cicer arietinum] |
| trEMBL | tr|G7K5P2|G7K5P2_MEDTR | 1.00E-52 | Transmembrane protein, putative {ECO:0000313|EMBL:AES98867.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01096 | 49974 | 56906 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001096s00036250.1 | PF13962.1 | PGG | 236 | 342 | 1.30E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.722 |
| SRR1783600 | control | 0.757 |
| SRR1783602 | moderate drought stress | 0.029 |
| SRR1811619 | moderate drought stress | 0.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.294 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.336 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.765 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.250 |
| SRR2868004 | Drought Stress (root) | 11.781 |
| SRR2967015 | Control (root) | 8.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.585 |
| SRR9715740 | Leaf | 0.482 |
| SRR9715741 | Leaf | 3.010 |
| SRR9715739 | Root | 1.292 |
| SRR9715742 | Root | 3.738 |
| SRR9715743 | Root | 2.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.686 |
| SRR8749028 | MeJA induced 9h | 3.655 |
| SRR8749029 | MeJA induced 9h | 6.491 |
| SRR8749030 | Uninduced | 3.447 |
| SRR8749031 | Uninduced | 1.981 |
| SRR8749032 | Uninduced | 1.974 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.743 |
| SRR8400027 | Control - Root | 1.573 |