Gene detail information of Glyur001095s00030007 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23160.1 | 2.00E-08 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 |
| NR | XP_010059366.1 | 4.68E-24 | PREDICTED: uncharacterized protein LOC104447312 [Eucalyptus grandis] |
| Swissprot | tr|P10978|POLX_TOBAC | 9.00E-06 | Endonuclease |
| trEMBL | tr|A5AZI6|A5AZI6_VITVI | 3.00E-21 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN67330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01095 | 5685 | 6485 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001095s00030007.1 | PF07727.9 | RVT_2 | 1 | 51 | 7.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.107 |
| SRR1811619 | moderate drought stress | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.547 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.013 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.494 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.686 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.662 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.782 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.879 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.792 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.750 |
| SRR2868004 | Drought Stress (root) | 13.184 |
| SRR2967015 | Control (root) | 14.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.056 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.369 |
| SRR8749028 | MeJA induced 9h | 6.070 |
| SRR8749029 | MeJA induced 9h | 4.776 |
| SRR8749030 | Uninduced | 3.839 |
| SRR8749031 | Uninduced | 1.793 |
| SRR8749032 | Uninduced | 1.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.115 |
| SRR8400027 | Control - Root | 0.000 |