Gene detail information of Glyur001094s00031555 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56040.1 | 0 | UDP-glucose pyrophosphorylase 3 |
| NR | XP_004500507.1 | 0 | PREDICTED: uncharacterized protein LOC101505226 [Cicer arietinum] |
| COG | YP_004650998.1 | 1.00E-164 | hypothetical protein PUV_01940 [Parachlamydia acanthamoebae UV-7] |
| trEMBL | tr|G7JBW8|G7JBW8_MEDTR | 0 | UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:AES71208.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01094 | 48898 | 58251 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.186 |
| SRR1783600 | control | 3.327 |
| SRR1783602 | moderate drought stress | 5.630 |
| SRR1811619 | moderate drought stress | 5.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.787 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.700 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.082 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.096 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.776 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.743 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.387 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.735 |
| SRR2868004 | Drought Stress (root) | 14.100 |
| SRR2967015 | Control (root) | 16.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.826 |
| SRR9715740 | Leaf | 23.521 |
| SRR9715741 | Leaf | 19.038 |
| SRR9715739 | Root | 1.463 |
| SRR9715742 | Root | 5.306 |
| SRR9715743 | Root | 3.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.205 |
| SRR8749028 | MeJA induced 9h | 3.242 |
| SRR8749029 | MeJA induced 9h | 1.967 |
| SRR8749030 | Uninduced | 2.544 |
| SRR8749031 | Uninduced | 0.881 |
| SRR8749032 | Uninduced | 1.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.774 |
| SRR8400027 | Control - Root | 58.320 |